DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Aatf and aatf

DIOPT Version :9

Sequence 1:NP_609066.1 Gene:Aatf / 33943 FlyBaseID:FBgn0031851 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001016308.1 Gene:aatf / 549062 XenbaseID:XB-GENE-1016683 Length:513 Species:Xenopus tropicalis


Alignment Length:543 Identity:170/543 - (31%)
Similarity:265/543 - (48%) Gaps:111/543 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 TVAEKVSKLLAHPNESDSAEDSDFDVATGPRLVDFEEEEYDLPDARSTDFRKRNVKLLSEQSDRY 75
            :::::::.|| :|.......:.|.|.||..|::|..||:.:..|.......:|....|.:...||
 Frog     4 SLSQELANLL-NPQPKFRDPEDDQDEATVARVIDRFEEDGNEDDVPMVSQLRRTSATLVDTDKRY 67

  Fly    76 KGKISSRKELDDDEDKDDEQEVSYEESDEDDENLTNFKQKLNAGGAEDSEEETAAGHSESGEESE 140
            .||.:|||:|    ..|.|.|:|.|:||.|:.:|.  ::..:||.::||||       |||.:.|
 Frog    68 LGKATSRKDL----QADFEGELSDEDSDGDEASLD--EELESAGESDDSEE-------ESGTDGE 119

  Fly   141 EIESNLTDFKKKFEAGDFKYDDDEEEDDDSEEEDHSQESEGDDDDSEDDEAEDDAIKPSDVM--S 203
            |               |.:.||..:..|:..:::.:.:.:....||.:...|||    .:|:  |
 Frog   120 E---------------DLEVDDSSQSLDEESDQEPAADEDSQKQDSGNSGLEDD----GEVLTFS 165

  Fly   204 KTNHQAEIQKGLAVQNQLRIWERLLELRINTQKFTSKANQLP---APETLTKLASESDELQSVLN 265
            |.....:.:||.|::||:.||::|||.||..||....|||||   |.||..|      |..:...
 Frog   166 KEKVSKDFEKGQAIKNQIAIWDQLLEGRIKIQKALLLANQLPQSSAFETFKK------EGGTEFF 224

  Fly   266 EAQERSSK----LLQQLLSLQSALHQQYSEMKKSV---KRKQPTEDS------------------ 305
            :||:.:.|    |::.|:.||..|..|:.|.:..:   |.|..:||.                  
 Frog   225 KAQKNNYKALKELMRSLVELQDELLYQFPETQYLIDGKKCKSQSEDEISSDEENEVEEDTEKLKR 289

  Fly   306 --GP----AVKKFGSVLQSNFQQMIGYRNEVLLKWDDRTKL---LTPGAGVKRKSLQEDYDIIKK 361
              .|    .|.::...::..|.....|||..|.||.|:|||   :..|.|...:|      |:.:
 Frog   290 ERAPKRKLEVDEYPEFMEKRFASFRTYRNNTLQKWHDKTKLSGKIGKGFGAFERS------ILTQ 348

  Fly   362 IGSALANREALVEKSQT---------------------PKNSQAEQQENTPVQRLK----HIYDD 401
            |...:.::|.|::::||                     |..:...|||......||    .::||
 Frog   349 IEQIMMDKERLLKRTQTKRSFYRILGKPLDSPSVPETVPNEAVDFQQEGKSNSHLKDQDEEMFDD 413

  Fly   402 SDFYHQQLRELIEYKASTSSNMSEIT--KQFVELQKLRQKMKKKVDTRASKGRKLRYVVHNKLIN 464
            .|||||.|||:||.|.|:.....::.  :|::.:||||.|:||||||:||||||:||.||:||::
 Frog   414 DDFYHQLLREVIERKTSSLDPNDQVAMGRQWLAIQKLRSKIKKKVDTKASKGRKIRYHVHSKLVS 478

  Fly   465 FMAPNESSDWTDASKSELYKSLF 487
            ||||.:.|...|.:::|||:|||
 Frog   479 FMAPIDHSTMNDDARTELYQSLF 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AatfNP_609066.1 AATF-Che1 211..337 CDD:290078 47/159 (30%)
TRAUB 405..487 CDD:285388 44/83 (53%)
aatfNP_001016308.1 Nop14 <23..>147 CDD:367841 43/151 (28%)
AATF-Che1 174..327 CDD:372572 47/158 (30%)
TRAUB 417..501 CDD:369726 44/83 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 93 1.000 Domainoid score I7454
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 207 1.000 Inparanoid score I3610
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D428754at33208
OrthoFinder 1 1.000 - - FOG0005185
OrthoInspector 1 1.000 - - oto102973
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4800
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

Return to query results.
Submit another query.