DRSC/TRiP Functional Genomics Resources

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Protein Alignment AkhR and Gnrhr

DIOPT Version :9

Sequence 1:NP_995639.1 Gene:AkhR / 33942 FlyBaseID:FBgn0025595 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_112300.2 Gene:Gnrhr / 81668 RGDID:70513 Length:327 Species:Rattus norvegicus


Alignment Length:338 Identity:104/338 - (30%)
Similarity:186/338 - (55%) Gaps:30/338 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AKVAEENDHRDLSNWSNVNDTNGTIHLTKDMV--FNDGHRLSITVYSILFVISTIGNSTVLYLL- 63
            |.:.::.:|        .:..|.:|.||:..:  .....::.:||...||::||..|::.|..| 
  Rat     5 ASLEQDQNH--------CSAINNSIPLTQGKLPTLTLSGKIRVTVTFFLFLLSTAFNASFLVKLQ 61

  Fly    64 --TKRRLRGP--LRIDIMLMHLAIADLMVTLLLMPMEIVWAWTVQWLSTDLMCRLMSFFRVFGLY 124
              |::|.:|.  .|:.::|.||.:|:|:.||::||::.:|..||||.:.:.:|:::|:.::|.:|
  Rat    62 RWTQKRKKGKKLSRMKVLLKHLTLANLLETLIVMPLDGMWNITVQWYAGEFLCKVLSYLKLFSMY 126

  Fly   125 LSSYVMVCISLDRYFAILKPL--KRSYNRGRIMLACAWLGSVVCSIPQAFLFHL-----EEHPAV 182
            ..:::||.|||||..|:.:||  :......|.|.:.||:.|:|.:.||.::|.:     ...|||
  Rat   127 APAFMMVVISLDRSLAVTQPLAVQSKSKLERSMTSLAWILSIVFAGPQLYIFRMIYLADGSGPAV 191

  Fly   183 TGYFQCVIFNSFRSDFDEKLYQAASMCSMYAFPLIMFIYCYGAIYLEIYRKSQRVL-KDVIAERF 246
              :.|||...||...:.|..|...:...::..||::.:.|...|...:    .||| :|....:.
  Rat   192 --FSQCVTHCSFPQWWHEAFYNFFTFSCLFIIPLLIMLICNAKIIFAL----TRVLHQDPRKLQL 250

  Fly   247 RRSNDDVLSRAKKRTLKMTITIVIVFIICWTPYYTISMWYWLDKHSAGKINPLLRKALFIFASTN 311
            .:|.::: .||:.||||||:.....|:|||||||.:.:|||.|.....:::..:....|:||..|
  Rat   251 NQSKNNI-PRARLRTLKMTVAFATSFVICWTPYYVLGIWYWFDPEMLNRVSEPVNHFFFLFAFLN 314

  Fly   312 SCMNPLVYGLYNI 324
            .|.:||:||.:::
  Rat   315 PCFDPLIYGYFSL 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AkhRNP_995639.1 7tm_1 55..319 CDD:278431 90/276 (33%)
GnrhrNP_112300.2 7tm_1 76..322 CDD:278431 83/252 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347655
Domainoid 1 1.000 164 1.000 Domainoid score I3854
eggNOG 1 0.900 - - E33208_3BFSB
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 180 1.000 Inparanoid score I3901
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368588at33208
OrthoFinder 1 1.000 - - FOG0003145
OrthoInspector 1 1.000 - - oto96236
orthoMCL 1 0.900 - - OOG6_105158
Panther 1 1.100 - - O PTHR24241
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X690
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.760

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