DRSC/TRiP Functional Genomics Resources

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Protein Alignment AkhR and gnrhr3

DIOPT Version :10

Sequence 1:NP_995639.1 Gene:AkhR / 33942 FlyBaseID:FBgn0025595 Length:455 Species:Drosophila melanogaster
Sequence 2:XP_073781263.1 Gene:gnrhr3 / 564687 ZFINID:ZDB-GENE-090128-1 Length:337 Species:Danio rerio


Alignment Length:341 Identity:112/341 - (32%)
Similarity:181/341 - (53%) Gaps:22/341 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NWSNVNDTNGTIHLTKDMVFNDGHRLSITVYSILFVISTIGNSTVLYLLTK-RRLRGPLRIDIML 78
            |||..|.:  .:.:.....|....:..:...::|||.:...|..:|..:.: |||...||  .::
Zfish     4 NWSQYNAS--LLPVWTAPSFTPAAQARVAATALLFVFAAGSNLALLVSVCRSRRLASHLR--PLI 64

  Fly    79 MHLAIADLMVTLLLMPMEIVWAWTVQWLSTDLMCRLMSFFRVFGLYLSSYVMVCISLDRYFAILK 143
            :.||.|||::|.::||:::||..||||.:.|::|:|:.|.::|.:..|::::|.|||||:.|||:
Zfish    65 LSLAAADLLMTFVVMPLDMVWNVTVQWYAGDVVCKLLCFLKLFAMQTSAFILVGISLDRHQAILR 129

  Fly   144 PLK--RSYNRGRIMLACAWLGSVVCSIPQAFLFHLEEHPAVTGYFQCVIFNSFRSDFDEKLYQAA 206
            ||.  .:..|.|..:..||..|.:.:.||.|:||..:..:| .:.|||...||...:.|..|...
Zfish   130 PLDTLTAPQRNRRRMLTAWSLSALIASPQLFIFHTVKAKSV-DFTQCVTHGSFSERWHETAYNMF 193

  Fly   207 SMCSMYAFPLIMFIYCYGAIYLEIYRKSQRVLKDVIAERFRRSNDDVLSRAKKRTLKMTITIVIV 271
            ...::|..||::...||..|.:||.|:.....|  ..:..|||..|::.:|:.:|||||:.||:.
Zfish   194 HFVTLYVIPLLVMSCCYTCILIEINRQLHNSNK--AGDSLRRSGTDMIPKARMKTLKMTLIIVLS 256

  Fly   272 FIICWTPYYTISMWYWLDKHSAGKINPLLRKALFIFASTNSCMNPLVYGLYN------------I 324
            |::||||||.:.:|||............:...||:|.:.|:|.:|::||||.            .
Zfish   257 FVVCWTPYYLLGIWYWFQPEMLTVTPEYVHHLLFVFGNLNTCCDPVIYGLYTPSFRSDLTRFCCC 321

  Fly   325 RGRMNNNNPSVNNRHT 340
            |...|...|....|||
Zfish   322 RHNKNTPRPQQPTRHT 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AkhRNP_995639.1 7tmA_AKHR 39..328 CDD:320504 102/303 (34%)
TM helix 1 40..66 CDD:320504 5/26 (19%)
TM helix 2 74..101 CDD:320504 10/26 (38%)
TM helix 3 112..142 CDD:320504 12/29 (41%)
TM helix 4 151..172 CDD:320504 7/20 (35%)
TM helix 5 200..229 CDD:320504 8/28 (29%)
TM helix 6 256..286 CDD:320504 15/29 (52%)
TM helix 7 298..323 CDD:320504 9/24 (38%)
gnrhr3XP_073781263.1 None

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