DRSC/TRiP Functional Genomics Resources

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Protein Alignment AkhR and TrissinR

DIOPT Version :9

Sequence 1:NP_995639.1 Gene:AkhR / 33942 FlyBaseID:FBgn0025595 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster


Alignment Length:519 Identity:96/519 - (18%)
Similarity:167/519 - (32%) Gaps:206/519 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AKVAEENDHRDLSNWSNVNDTNGTIHLTKDMVFN--DGHRLSITVYSILFVISTIGNSTVLYLLT 64
            |.:.:|.|....|.:                :|:  |...:.||:|:::|.....||..|:.::|
  Fly   162 AVIEDEEDAEKASEY----------------IFDRTDVRIIFITLYTLVFCCCFFGNLLVILVVT 210

  Fly    65 -KRRLRGPLRIDIMLMHLAIADLMVTLLLMPMEIVWAWTVQWLSTDLMCRLMSFFRVFGLYLSSY 128
             .||||.  ..:..|.:||.||..|.|..:...:.......|:..:.:||:..|........|.:
  Fly   211 LSRRLRS--ITNFFLANLAFADFCVGLFCVMQNLSIYLIESWVFGEFLCRMYQFVHSLSYTASIF 273

  Fly   129 VMVCISLDRYFAILKPLK----RSYNRGRIMLACAWLGSVVCSIPQAFLF-------HLEEHPAV 182
            ::|.|.::|||||:.|:.    .:..|.|:::...|:.|.|.|.|: |:|       |.::    
  Fly   274 ILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITSAVYSTPK-FVFSKTIKNIHTQD---- 333

  Fly   183 TGYFQ--CVIFNSFRSDFDEKLYQAASMCSMYAFPLIMFIYCYGAIYLEIYRKSQRVLKDVI--- 242
             |..:  ||:   .|..|:.||....:...:|..||::....|..|.:.::|.|:.:...|:   
  Fly   334 -GQEEEICVL---DREMFNSKLLDMINFVLLYVMPLLVMTVLYSKIAIALWRSSRGLTPHVVQHQ 394

  Fly   243 ----------------------------------------------------------------- 242
                                                                             
  Fly   395 HQQPQQPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQSAASSAGVVGVGLGGGGGGGPGPSLAS 459

  Fly   243 ----------------------------------------------------------------- 242
                                                                             
  Fly   460 GGSSTTSLSRKQSSKYEKRGVSITESQLDNCKVSLEADRPIVSACRKTSFYHHGHAHHQRAGNAS 524

  Fly   243 -----------AERFRRSNDDVLSRAKKRTLKMTITIVIVFIICWTPYYTISMW-YWLDKHSA-G 294
                       |.....|:.:|| ||::..::|.|..|:.|.:|..||:...|| ||...:.. .
  Fly   525 VGGGSGGAGAGATHMSHSSSNVL-RARRGVVRMLIIFVLTFALCNLPYHARKMWQYWSRSYRGDS 588

  Fly   295 KINPLLRKALFIFASTNSCMNPLVYGLY--NIRGRM--------------NNNNPSVNNRHTSL 342
            ..|.||....|:....||.:|||:|...  |.|..|              :::|.|::::..:|
  Fly   589 NFNALLTPLTFLVTYFNSGVNPLLYAFLSRNFRKGMKELLLCSWKKGKGKSSSNSSMHHKRKAL 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AkhRNP_995639.1 7tm_1 55..319 CDD:278431 79/423 (19%)
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 39/138 (28%)
7tm_1 201..>385 CDD:278431 52/194 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24241
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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