DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AkhR and GNRHR

DIOPT Version :9

Sequence 1:NP_995639.1 Gene:AkhR / 33942 FlyBaseID:FBgn0025595 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_000397.1 Gene:GNRHR / 2798 HGNCID:4421 Length:328 Species:Homo sapiens


Alignment Length:297 Identity:96/297 - (32%)
Similarity:167/297 - (56%) Gaps:15/297 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RLSITVYSILFVISTIGNSTVLYLL---TKRRLRGP--LRIDIMLMHLAIADLMVTLLLMPMEIV 98
            ::.:||...||::|...|::.|..|   |:::.:|.  .|:.::|.||.:|:|:.||::||::.:
Human    36 KIRVTVTFFLFLLSATFNASFLLKLQKWTQKKEKGKKLSRMKLLLKHLTLANLLETLIVMPLDGM 100

  Fly    99 WAWTVQWLSTDLMCRLMSFFRVFGLYLSSYVMVCISLDRYFAILKP--LKRSYNRGRIMLACAWL 161
            |..||||.:.:|:|:::|:.::|.:|..:::||.|||||..||.:|  ||.:...|:.|:..||:
Human   101 WNITVQWYAGELLCKVLSYLKLFSMYAPAFMMVVISLDRSLAITRPLALKSNSKVGQSMVGLAWI 165

  Fly   162 GSVVCSIPQAFLF---HLEEHPAVTGYF-QCVIFNSFRSDFDEKLYQAASMCSMYAFPLIMFIYC 222
            .|.|.:.||.::|   ||.:....|..| |||...||...:.:..|...:...::..||.:.:.|
Human   166 LSSVFAGPQLYIFRMIHLADSSGQTKVFSQCVTHCSFSQWWHQAFYNFFTFSCLFIIPLFIMLIC 230

  Fly   223 YGAIYLEIYRKSQRVLKDVIAERFRRSNDDVLSRAKKRTLKMTITIVIVFIICWTPYYTISMWYW 287
            ...|...:    .|||.....|.....:.:.:.||:.:|||||:.....|.:||||||.:.:|||
Human   231 NAKIIFTL----TRVLHQDPHELQLNQSKNNIPRARLKTLKMTVAFATSFTVCWTPYYVLGIWYW 291

  Fly   288 LDKHSAGKINPLLRKALFIFASTNSCMNPLVYGLYNI 324
            .|.....:::..:....|:||..|.|.:||:||.:::
Human   292 FDPEMLNRLSDPVNHFFFLFAFLNPCFDPLIYGYFSL 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AkhRNP_995639.1 7tm_1 55..319 CDD:278431 89/274 (32%)
GNRHRNP_000397.1 7tm_GPCRs 36..328 CDD:333717 96/295 (33%)
TM helix 1 38..67 CDD:320095 9/28 (32%)
TM helix 2 77..100 CDD:320095 9/22 (41%)
TM helix 3 115..137 CDD:320095 6/21 (29%)
TM helix 4 158..174 CDD:320095 5/15 (33%)
TM helix 5 209..232 CDD:320095 4/22 (18%)
TM helix 6 263..288 CDD:320095 12/24 (50%)
TM helix 7 302..327 CDD:320095 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165154057
Domainoid 1 1.000 166 1.000 Domainoid score I3890
eggNOG 1 0.900 - - E33208_3BFSB
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 178 1.000 Inparanoid score I4032
Isobase 1 0.950 - 0 Normalized mean entropy S5517
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368588at33208
OrthoFinder 1 1.000 - - FOG0003145
OrthoInspector 1 1.000 - - otm40773
orthoMCL 1 0.900 - - OOG6_105158
Panther 1 1.100 - - O PTHR24241
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3328
SonicParanoid 1 1.000 - - X690
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.740

Return to query results.
Submit another query.