DRSC/TRiP Functional Genomics Resources

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Protein Alignment AkhR and gnrr-2

DIOPT Version :9

Sequence 1:NP_995639.1 Gene:AkhR / 33942 FlyBaseID:FBgn0025595 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001256583.1 Gene:gnrr-2 / 182647 WormBaseID:WBGene00007614 Length:379 Species:Caenorhabditis elegans


Alignment Length:380 Identity:96/380 - (25%)
Similarity:165/380 - (43%) Gaps:95/380 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DLSNWSNVNDTNGTIHLTKDMVFNDGHRLSITVYSILFVIS-TIGNSTVLYLLTKRRLRGPLRID 75
            ::||    .:|.|  |:..|..       .:.:|.|..:|. .:..||::|:|.:.|   ..:..
 Worm    18 EISN----QETLG--HVPSDYA-------QMLLYGIFALIGLPVNISTLIYMLKRYR---HAKSF 66

  Fly    76 IMLMH--LAIADLMVTLLLMPMEIVWAWTVQWLSTDLMCRLMSFFRVFGLYLSSYVMVCISLDRY 138
            ::|:|  |.|:|::|..|.:|..|.|..|::|.....:|:.|.|...|...:||.:||||:|.|.
 Worm    67 LLLLHINLNISDILVLGLYVPGLIGWLVTLEWRGGAYLCKFMRFVDAFVFAISSNIMVCIALYRL 131

  Fly   139 FAILKPL-KRSYNRGRI--MLACAWLGSVVCSIPQAFLFHLEEHPAVTGYFQCV-----IFNSFR 195
            .|:..|| ..:....|:  ||..||..:||..:||..:::..:...:|   |||     |.|. |
 Worm   132 SALRYPLWVNAVGHSRVPRMLILAWALAVVTMLPQMLVWNEVQFSNIT---QCVTVWTEIINK-R 192

  Fly   196 SDFDE------KLYQAASMCSMYAFPLIMFIYCYGAIYLEIYR--------KSQRVLKDVIA--- 243
            ....|      |||...:...::..||::.:.||..|..:||:        .|...|.::.:   
 Worm   193 EKLSESELRNMKLYSIQNATIIFYIPLMILVACYVLILKDIYKTLNTDTECSSAAYLSEMSSSKT 257

  Fly   244 -------------------------ERFRRSNDDVLSRAKKRTLKMTITIVIVFIICWTPYYTIS 283
                                     |:||        |||.|:|::|:.:::.:.:.|.||..:|
 Worm   258 GGKAALHKKDQESFVTLTTRTVRGQEKFR--------RAKVRSLRITLLLILTYAVTWLPYNLLS 314

  Fly   284 MW---YWLDKHSAGKINPLLRKALFIFASTNSCMNPLVYG-------LYNIRGRM 328
            .|   :| |.:.....:..:..:|.:.   ||.:||.:||       |:..|.|:
 Worm   315 WWMVLHW-DSYRENLDSNYILNSLVVL---NSVINPFIYGRCQGIRFLFKCRERL 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AkhRNP_995639.1 7tm_1 55..319 CDD:278431 82/318 (26%)
gnrr-2NP_001256583.1 7tm_GPCRs 38..352 CDD:391938 87/332 (26%)
TM helix 1 38..59 CDD:341315 7/20 (35%)
TM helix 2 67..94 CDD:341315 10/26 (38%)
TM helix 3 105..135 CDD:341315 13/29 (45%)
TM helix 4 147..168 CDD:341315 9/20 (45%)
TM helix 5 193..232 CDD:341315 9/38 (24%)
TM helix 6 287..316 CDD:341315 10/28 (36%)
TM helix 7 328..352 CDD:341315 7/26 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28850
OrthoDB 1 1.010 - - D368588at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X690
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.930

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