DRSC/TRiP Functional Genomics Resources

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Protein Alignment AkhR and gnrhr2

DIOPT Version :10

Sequence 1:NP_995639.1 Gene:AkhR / 33942 FlyBaseID:FBgn0025595 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001107547.1 Gene:gnrhr2 / 100135415 XenbaseID:XB-GENE-5867415 Length:410 Species:Xenopus tropicalis


Alignment Length:350 Identity:117/350 - (33%)
Similarity:191/350 - (54%) Gaps:21/350 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 FNDGHRLSITVYSILFVISTIGNSTVLYLLTKRRLRGPLRIDIMLMHLAIADLMVTLLLMPMEIV 98
            |:...:..:.:..::|.:|...|..|::..|....:....:.|::::|..|||:||.::||::.:
 Frog    47 FSPAAKARVIITFVIFALSAFCNLAVVWASTNTSRKKRSHVRILILNLTTADLLVTFIVMPLDAI 111

  Fly    99 WAWTVQWLSTDLMCRLMSFFRVFGLYLSSYVMVCISLDRYFAILKPL--KRSYNRGRIMLACAWL 161
            |..||||.:.||.||::.|.::..:|..::|.|.||:||..|||.||  ..:..|.:|||:.|||
 Frog   112 WNITVQWQAGDLACRILMFLKLLSMYSCAFVTVVISIDRQSAILNPLGISEAKKRNKIMLSVAWL 176

  Fly   162 GSVVCSIPQAFLFHLEEHPAVTGYFQCVIFNSFRSDFDEKLYQAASMCSMYAFPLIMFIYCYGAI 226
            .|::.|:||.||||.........:.||....||:..:.|.:|...|...::..||::.|.||..|
 Frog   177 MSILLSLPQLFLFHTVTITEPQNFTQCTTRGSFQEHWQETVYNMVSFVCLFLLPLLIMISCYSRI 241

  Fly   227 YLEIYRKSQRVLKDVIAER---FRRSNDDVLSRAKKRTLKMTITIVIVFIICWTPYYTISMWYWL 288
            .:||   |:|:.|..::.:   .|||.::: .:|:.|||||:|.||..|||||||||.:.:|||.
 Frog   242 LIEI---SRRMSKGALSSKEVYLRRSKNNI-PKARMRTLKMSIVIVSSFIICWTPYYLLGLWYWF 302

  Fly   289 -DKHSAGKINPLLRKALFIFASTNSCMNPLVYGLYNIRGRMNNNNPSVNNRHTSLSNRLDSSNQL 352
             .:....:::..|...||||...|:|::|:.|||:.|..|...:......|    ::.||:|:.:
 Frog   303 YPEAMEERVSQSLTHILFIFGLVNACLDPITYGLFTIHFRKGLHRYCRGGR----ASDLDTSSSV 363

  Fly   353 -------MQKQLTNNSLLNGRGQVM 370
                   |........:||...|||
 Frog   364 TGSFRCSMSSFRAKKIVLNQELQVM 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AkhRNP_995639.1 7tmA_AKHR 39..328 CDD:320504 105/294 (36%)
TM helix 1 40..66 CDD:320504 5/25 (20%)
TM helix 2 74..101 CDD:320504 10/26 (38%)
TM helix 3 112..142 CDD:320504 11/29 (38%)
TM helix 4 151..172 CDD:320504 11/20 (55%)
TM helix 5 200..229 CDD:320504 9/28 (32%)
TM helix 6 256..286 CDD:320504 18/29 (62%)
TM helix 7 298..323 CDD:320504 11/24 (46%)
gnrhr2NP_001107547.1 7tmA_GnRHR_vertebrate 52..345 CDD:320505 106/296 (36%)
TM helix 1 53..79 CDD:320505 5/25 (20%)
TM helix 2 87..114 CDD:320505 10/26 (38%)
TM helix 3 125..155 CDD:320505 11/29 (38%)
TM helix 4 166..187 CDD:320505 11/20 (55%)
TM helix 5 215..244 CDD:320505 9/28 (32%)
TM helix 6 270..300 CDD:320505 18/29 (62%)
TM helix 7 313..338 CDD:320505 11/24 (46%)

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