DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp and NELL2

DIOPT Version :9

Sequence 1:NP_001137802.1 Gene:Tsp / 33941 FlyBaseID:FBgn0031850 Length:1060 Species:Drosophila melanogaster
Sequence 2:XP_016874830.1 Gene:NELL2 / 4753 HGNCID:7751 Length:871 Species:Homo sapiens


Alignment Length:883 Identity:191/883 - (21%)
Similarity:281/883 - (31%) Gaps:323/883 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TRVLLIGLTALALTFVDVASLSLDPVASAELEQFIRKGDVVISTRHIRPRRKLHISIEALFMIDF 68
            |..|:.||.|:....|| .||.:|.:...||.:         ||..:|....||...:|....|.
Human    59 TFCLIFGLGAVWGLGVD-PSLQIDVLTELELGE---------STTGVRQVPGLHNGTKAFLFQDT 113

  Fly    69 PML-----------------KHKMSFFLDRKQQRVT--------------LDISANG-------- 94
            |..                 ||:.:..:..||..:.              |::.::|        
Human   114 PRSIKASTATAEQFFQKLRNKHEFTILVTLKQTHLNSGVILSIHHLDHRYLELESSGHRNEVRLH 178

  Fly    95 ---ATESRNFEI-PNINETSTIRSLALQFSKNRITLHVDCKASTHHDIDMNLAKLYTQM------ 149
               .:...:.|: |.|........|:|..|.:.:.||:||.            |:|.::      
Human   179 YRSGSHRPHTEVFPYILADDKWHKLSLAISASHLILHIDCN------------KIYERVVEKPST 231

  Fly   150 DDPVIKLF----RERKYPLHFDGDMEH---------------SLQR----ANCQKGNHRRGNRRM 191
            |.|:...|    |...:. :|.|.|:.               .|.|    ..|...|...|..:.
Human   232 DLPLGTTFWLGQRNNAHG-YFKGIMQDVQLLVMPQGFIAQCPDLNRMFVIPACPTCNDFHGLVQK 295

  Fly   192 LRN----------KITEREKNKKRDVRGWYEPTIAREGVVDHRHQEVPTDVER-GDIPVLNG--D 243
            :..          |::..|:...|..:.:.|.|...:|..   ::|..:.::. .:...|||  .
Human   296 IMELQDILAKTSAKLSRAEQRMNRLDQCYCERTCTMKGTT---YREFESWIDGCKNCTCLNGTIQ 357

  Fly   244 CEDALARS----LSDLLALV--KLLRE-----------------DVAHQRQEIAYL-------RM 278
            ||..:..:    |...||.|  |..:|                 :..:....:..|       ..
Human   358 CETLICPNPDCPLKSALAYVDGKCCKECKSICQFQGRTYFEGERNTVYSSSGVCVLYECKDQTMK 422

  Fly   279 LLEN-----------------------CAG---------------CKN--------------PLT 291
            |:|:                       |.|               |:|              .|.
Human   423 LVESSGCPALDCPESHQITLSHSCCKVCKGYDFCSERHNCMENSICRNLNDRAVCSCRDGFRALR 487

  Fly   292 TDNQLRIEPDCRSANPCYPG-------VECLDSAAGPRCGHCPLGFIG-DGKSCKPGVTCA--HH 346
            .||..     |...:.|..|       ..|:::.....| .|..|:|. |..||.....|.  .|
Human   488 EDNAY-----CEDIDECAEGRHYCRENTMCVNTPGSFMC-ICKTGYIRIDDYSCTEHDECITNQH 546

  Fly   347 MCYPGVQCHDTVNGAQCDSCPAGYEGDGRTCSLRNPCLDTPCPSGAQCLQVGYPPYFHCISCPMG 411
            .|.....|.:||.|..| .|..||.|:|.||  :..|.| .|.:|..|:..      :..:||.|
Human   547 NCDENALCFNTVGGHNC-VCKPGYTGNGTTC--KAFCKD-GCRNGGACIAA------NVCACPQG 601

  Fly   412 HEVNGTSCR-DMNECL-LYDPCDELATCTNLSPGFQCSPCPVGFDGTHAHGYFADYYSVDYRRQT 474
              ..|.||. |::||. .:..||..|.|.|| ||:....|.   ||.|.:|.|:.      ..::
Human   602 --FTGPSCETDIDECSDGFVQCDSRANCINL-PGWYHCECR---DGYHDNGMFSP------SGES 654

  Fly   475 CLDVDECRTGFFRCPEHSTCINEIGSYRCQC-----------HEGYVT-NGTYSCL--DRSSVFM 525
            |.|:|||.||...|...:.|.|..|.|.|:|           |:|.|. ||....|  ||.||..
Human   655 CEDIDECGTGRHSCANDTICFNLDGGYDCRCPHGKNCTGDCIHDGKVKHNGQIWVLENDRCSVCS 719

  Fly   526 CPDGTVCDRNAVCLRMDN--------------IRHKC-HCNVGWAGNGLICGRDT---------- 565
            |.:|.|..|..|| ..:|              :..:| |.|    |..|....||          
Human   720 CQNGFVMCRRMVC-DCENPTVDLFCCPECDPRLSSQCLHQN----GETLYNSGDTWVQNCQQCRC 779

  Fly   566 ---DVDGWPDQAIGCPELRC------QRDNCPKLPNSGQEDADLDGHGDGCDDDA---------- 611
               :||.||   :.||::.|      :.:.||:...            |.|..|.          
Human   780 LQGEVDCWP---LPCPDVECEFSILPENECCPRCVT------------DPCQADTIRNDITKTCL 829

  Fly   612 DGDNVQNSQDNCWLAYNTEQLDSDGDKVGDVCDNCVLK 649
            |..||.....:.|:.:.||            |..|..|
Human   830 DEMNVVRFTGSSWIKHGTE------------CTLCQCK 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TspNP_001137802.1 EGF_CA 477..513 CDD:284955 16/47 (34%)
TSP3 repeat_1C 563..595 CDD:275367 11/50 (22%)
TSP3 repeat_short 632..654 CDD:275365 3/18 (17%)
TSP_3 656..690 CDD:280556
TSP3 repeat_long 656..690 CDD:275366
TSP3 repeat_short 691..713 CDD:275366
TSP3 repeat_long 714..751 CDD:275365
TSP_3 715..751 CDD:280556
TSP3 repeat_short 752..787 CDD:275366
TSP_3 789..822 CDD:280556
TSP_C 841..1038 CDD:283408
coiled coil 245..286 CDD:293927 12/108 (11%)
TSPcc_insect 245..286 CDD:293927 12/108 (11%)
EGF_CA 343..377 CDD:214542 13/35 (37%)
EGF_CA 421..457 CDD:238011 14/36 (39%)
NELL2XP_016874830.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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