DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp and nell2b

DIOPT Version :9

Sequence 1:NP_001137802.1 Gene:Tsp / 33941 FlyBaseID:FBgn0031850 Length:1060 Species:Drosophila melanogaster
Sequence 2:XP_002661425.1 Gene:nell2b / 336082 ZFINID:ZDB-GENE-030131-8026 Length:815 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TspNP_001137802.1 EGF_CA 477..513 CDD:284955
TSP3 repeat_1C 563..595 CDD:275367
TSP3 repeat_short 632..654 CDD:275365
TSP_3 656..690 CDD:280556
TSP3 repeat_long 656..690 CDD:275366
TSP3 repeat_short 691..713 CDD:275366
TSP3 repeat_long 714..751 CDD:275365
TSP_3 715..751 CDD:280556
TSP3 repeat_short 752..787 CDD:275366
TSP_3 789..822 CDD:280556
TSP_C 841..1038 CDD:283408
coiled coil 245..286 CDD:293927
TSPcc_insect 245..286 CDD:293927
EGF_CA 343..377 CDD:214542
EGF_CA 421..457 CDD:238011
nell2bXP_002661425.1 LamG 28..213 CDD:304605
VWC 273..329 CDD:302663
EGF_CA 441..>473 CDD:284955
EGF_3 487..522 CDD:289699
EGF_CA 556..590 CDD:214542
EGF_CA 603..>634 CDD:284955
VWC 641..693 CDD:302663
VWC 710..757 CDD:214564
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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