DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp and Comp

DIOPT Version :10

Sequence 1:NP_523495.2 Gene:Tsp / 33941 FlyBaseID:FBgn0031850 Length:1060 Species:Drosophila melanogaster
Sequence 2:NP_036966.2 Gene:Comp / 25304 RGDID:2378 Length:755 Species:Rattus norvegicus


Alignment Length:811 Identity:384/811 - (47%)
Similarity:479/811 - (59%) Gaps:91/811 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 RGDIPVLNGDCEDALARSLSDLLALVKLLREDVAHQRQEIAYLRMLLENCAGC-KNPLTTDNQLR 297
            :|.|| |.||....:.|.|.:..|.::.:||.:..|.:||.:|:..:..|..| ..|..|     
  Rat    20 QGQIP-LGGDLAPQMLRELQETNAALQDVRELLRQQVKEITFLKNTVMECDACGMQPART----- 78

  Fly   298 IEPDCRSANPCYPGVECLDSAAGPRCGHCPLGFIGDGKSCKPGVTCAHHMCYPGVQCHDTVNGAQ 362
                        ||:                       |.:|...||...|:|||.|.:|..||:
  Rat    79 ------------PGL-----------------------SVRPVPLCAPGSCFPGVVCTETATGAR 108

  Fly   363 CDSCPAGYEGDGRTCSLRNPCLDTPCPSGAQCLQVGYPPYFHCISCPMGHEVNGTSCRDMNECLL 427
            |..||.||.|                                          ||:.|.|:|||..
  Rat   109 CGPCPPGYTG------------------------------------------NGSHCTDVNECNA 131

  Fly   428 YDPCDELATCTNLSPGFQCSPCPVGFDGTHAHGYFADYYSVDYRRQTCLDVDECRTGFFRCPEHS 492
            : ||.....|.|.||||.|..||.||.|....|....:...:  :|.|.|::||.||...|..:|
  Rat   132 H-PCFPRVRCINTSPGFHCEACPPGFSGPTHEGVGLTFAKTN--KQVCTDINECETGQHNCVPNS 193

  Fly   493 TCINEIGSYRC-QCHEGYVTNGTYSCLDRSSVFMCPDG--TVCDRNAVCLRMDNIRHKCHCNVGW 554
            .|:|..||::| .|..|:|.:....|..|...| ||||  :.|...|.|:...:....|.|.|||
  Rat   194 VCVNTRGSFQCGPCQPGFVGDQRSGCQRRGQHF-CPDGSPSPCHEKADCILERDGSRSCVCAVGW 257

  Fly   555 AGNGLICGRDTDVDGWPDQAIGCPELRCQRDNCPKLPNSGQEDADLDGHGDGCDDDADGDNVQNS 619
            |||||:||||||:||:||:.:.|.|.:|::|||..:|||||||.|.||.||.||.|||||.|.|.
  Rat   258 AGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQEDVDRDGIGDACDPDADGDGVPNE 322

  Fly   620 QDNCWLAYNTEQLDSDGDKVGDVCDNCVLKYNPRQLDTDEDGLGDECDGDIDNDSIPNALDNCPL 684
            ||||.|..|.:|.:||.||.||.||||..:.|..|.|||.||.||.||.|||.|.|.|..||||.
  Rat   323 QDNCPLVRNPDQRNSDKDKWGDACDNCRSQKNDDQKDTDRDGQGDACDDDIDGDRIRNVADNCPR 387

  Fly   685 LPNPSQSDVDNDGVGDACDNCPNLPNPDQKDRDMDFVGDACHRDIDGDDDGVPNSLDNCPMVSNS 749
            :||..|||.|.|||||||||||...||||:|.|.|||||||..|.|.|.||..:|.||||.|.||
  Rat   388 VPNFDQSDSDGDGVGDACDNCPQKDNPDQRDVDHDFVGDACDSDQDQDGDGHQDSRDNCPTVPNS 452

  Fly   750 DQLDTDGDGTGDECDDDMDGDGIPNYKDNCPLAKNPKQDDFNRNGKGDSCEDDEDVDGVPNGMDN 814
            .|.|:|.||.||.||||.|.||:|:.:|||.|..||.|:|.:|:|.||:|:.|.|.|.|.:.:|.
  Rat   453 AQQDSDHDGKGDACDDDDDNDGVPDSRDNCRLVPNPGQEDNDRDGVGDACQGDFDADKVIDKIDV 517

  Fly   815 CPNNSMIHHTDFRTLQTIPLDPKGLSQADPNWVVHANGTEIVQTLNSDPGLAVGKDAFGGVDFDG 879
            ||.|:.:..||||..||:.|||:|.:|.||||||...|.|||||:|||||||||..||.||||:|
  Rat   518 CPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEG 582

  Fly   880 TFYINDDTDDDYAGFVFSYQSSYKYYVVQWKKGTQTYWEPRPFTASAAPGIQIKLVNSTEGPGPM 944
            ||::|..||||||||:|.||.|..:|||.||:..||||:..||.|.|.||||:|.|.|:.|||..
  Rat   583 TFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGEQ 647

  Fly   945 MRNSLWHEGNTDGEARLLWKDPKNIAWKERTSYRWSLVHRPAIGLIRLQMHEGNRLIFDSGNVFD 1009
            :||:|||.|:|..:.|||||||:|:.||::|||||.|.|||.:|.||::.:||..|:.||..|.|
  Rat   648 LRNALWHTGDTASQVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLD 712

  Fly  1010 STLKGGRLGVFCFSQRMIIWSNLQYKCNNRV 1040
            :.::|||||||||||..|||:||:|:||:.:
  Rat   713 TAMRGGRLGVFCFSQENIIWANLRYRCNDTI 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TspNP_523495.2 coiled coil 245..286 CDD:293927 10/40 (25%)
TSPcc_insect 245..286 CDD:293927 10/40 (25%)
EGF_CA 421..457 CDD:238011 18/35 (51%)
EGF_CA 477..508 CDD:429571 13/31 (42%)
TSP3 repeat_1C 563..595 CDD:275367 17/31 (55%)
TSP3 repeat_short 632..654 CDD:275365 11/21 (52%)
TSP_3 656..690 CDD:367074 21/33 (64%)
TSP3 repeat_long 656..690 CDD:275366 21/33 (64%)
TSP3 repeat_short 691..713 CDD:275366 16/21 (76%)
TSP_3 714..751 CDD:367074 22/36 (61%)
TSP3 repeat_long 714..751 CDD:275365 22/36 (61%)
TSP3 repeat_short 752..787 CDD:275366 20/34 (59%)
TSP_3 789..822 CDD:367074 14/32 (44%)
TSP_C 841..1037 CDD:461725 120/195 (62%)
CompNP_036966.2 COMP N-terminal 21..84 22/103 (21%)
coiled coil 29..71 CDD:293924 10/41 (24%)
TSP-5cc 29..71 CDD:293924 10/41 (24%)
EGF_CA 125..160 CDD:238011 18/35 (51%)
EGF_CA 178..204 CDD:429571 11/25 (44%)
TSP type-3 1 266..298 17/31 (55%)
TSP3 repeat_short 266..298 CDD:275365 17/31 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..501 127/205 (62%)
TSP_3 299..334 CDD:367074 22/34 (65%)
TSP3 repeat_long 299..334 CDD:275366 22/34 (65%)
TSP3 repeat_short 335..357 CDD:275366 11/21 (52%)
TSP3 repeat_long 358..393 CDD:275365 21/34 (62%)
TSP_3 395..454 CDD:367074 39/58 (67%)
TSP3 repeat_short 395..416 CDD:275365 15/20 (75%)
TSP3 repeat_long 417..454 CDD:275365 22/36 (61%)
TSP type-3 8 491..526 14/34 (41%)
TSP_3 491..525 CDD:367074 14/33 (42%)
TSP3 repeat_long 491..522 CDD:275365 13/30 (43%)
Mediates cell survival and induction of the IAP family of survival proteins. /evidence=ECO:0000250 525..755 132/219 (60%)
TSP_C 544..741 CDD:461725 121/196 (62%)

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