DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp and Comp

DIOPT Version :9

Sequence 1:NP_001137802.1 Gene:Tsp / 33941 FlyBaseID:FBgn0031850 Length:1060 Species:Drosophila melanogaster
Sequence 2:NP_057894.2 Gene:Comp / 12845 MGIID:88469 Length:755 Species:Mus musculus


Alignment Length:812 Identity:389/812 - (47%)
Similarity:480/812 - (59%) Gaps:93/812 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 RGDIPVLNGDCEDALARSLSDLLALVKLLREDVAHQRQEIAYLRMLLENCAGC-KNPLTTDNQLR 297
            :|.|| |.||....:.|.|.:..|.::.:||.:..|.:||.:|:..:..|..| ..|..|     
Mouse    20 QGQIP-LGGDLAPQMLRELQETNAALQDVRELLRQQVKEITFLKNTVMECDACGMQPART----- 78

  Fly   298 IEPDCRSANPCYPGVECLDSAAGPRCGHCPLGFIGDGKSCKPGVTCAHHMCYPGVQCHDTVNGAQ 362
                        ||:                       |.:|...||...|:|||.|.:|..||:
Mouse    79 ------------PGL-----------------------SVRPVPLCAPGSCFPGVVCSETATGAR 108

  Fly   363 CDSCPAGYEGDGRTCSLRNPCLDTPCPSGAQCLQVGYPPYFHCISCPMGHEVNGTSCRDMNECLL 427
            |..||.||.|                                          ||:.|.|:|||..
Mouse   109 CGPCPPGYTG------------------------------------------NGSHCTDVNECNA 131

  Fly   428 YDPCDELATCTNLSPGFQCSPCPVGFDGTHAHGYFADYYSVDYRRQTCLDVDECRTGFFRCPEHS 492
            : ||.....|.|.||||.|..||.||.|....|....:  ....:|.|.|::||.||...|..:|
Mouse   132 H-PCFPRVRCINTSPGFHCEACPPGFSGPTHEGVGLTF--AKSNKQVCTDINECETGQHNCVPNS 193

  Fly   493 TCINEIGSYRC-QCHEGYVTNGTYSCLDRSSVFMCPDG--TVCDRNAVC-LRMDNIRHKCHCNVG 553
            .|:|..||::| .|..|:|.:.|..|..|...| ||||  :.|...|.| |..|..| .|.|.||
Mouse   194 VCVNTRGSFQCGPCQPGFVGDQTSGCQRRGQHF-CPDGSPSPCHEKANCVLERDGSR-SCVCAVG 256

  Fly   554 WAGNGLICGRDTDVDGWPDQAIGCPELRCQRDNCPKLPNSGQEDADLDGHGDGCDDDADGDNVQN 618
            ||||||:||||||:||:||:.:.|.|.:|::|||..:|||||||.|.||.||.||.|||||.|.|
Mouse   257 WAGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQEDVDRDGIGDACDPDADGDGVPN 321

  Fly   619 SQDNCWLAYNTEQLDSDGDKVGDVCDNCVLKYNPRQLDTDEDGLGDECDGDIDNDSIPNALDNCP 683
            .||||.|..|.:|.:||.||.||.||||..|.|..|.|||.||.||.||.|||.|.|.|..||||
Mouse   322 EQDNCPLVRNPDQRNSDSDKWGDACDNCRSKKNDDQKDTDLDGRGDACDDDIDGDRIRNVADNCP 386

  Fly   684 LLPNPSQSDVDNDGVGDACDNCPNLPNPDQKDRDMDFVGDACHRDIDGDDDGVPNSLDNCPMVSN 748
            .:||..|||.|.|||||||||||...||||:|.|.|||||||..|.|.|.||..:|.||||.|.|
Mouse   387 RVPNFDQSDSDGDGVGDACDNCPQKDNPDQRDVDHDFVGDACDSDQDQDGDGHQDSRDNCPTVPN 451

  Fly   749 SDQLDTDGDGTGDECDDDMDGDGIPNYKDNCPLAKNPKQDDFNRNGKGDSCEDDEDVDGVPNGMD 813
            |.|.|:|.||.||.||||.|.||:|:.:|||.|..||.|:|.:|:|.||:|:.|.|.|.|.:.:|
Mouse   452 SAQQDSDHDGKGDACDDDDDNDGVPDSRDNCRLVPNPGQEDNDRDGVGDACQGDFDADKVIDKID 516

  Fly   814 NCPNNSMIHHTDFRTLQTIPLDPKGLSQADPNWVVHANGTEIVQTLNSDPGLAVGKDAFGGVDFD 878
            .||.|:.:..||||..||:.|||:|.:|.||||||...|.|||||:|||||||||..||.||||:
Mouse   517 VCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFE 581

  Fly   879 GTFYINDDTDDDYAGFVFSYQSSYKYYVVQWKKGTQTYWEPRPFTASAAPGIQIKLVNSTEGPGP 943
            |||::|..||||||||:|.||.|..:|||.||:..||||:..||.|.|.||||:|.|.|:.|||.
Mouse   582 GTFHVNTATDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGE 646

  Fly   944 MMRNSLWHEGNTDGEARLLWKDPKNIAWKERTSYRWSLVHRPAIGLIRLQMHEGNRLIFDSGNVF 1008
            .:||:|||.|:|..:.|||||||:|:.||::|||||.|.|||.:|.||::.:||..|:.||..|.
Mouse   647 QLRNALWHTGDTASQVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVL 711

  Fly  1009 DSTLKGGRLGVFCFSQRMIIWSNLQYKCNNRV 1040
            |:.::|||||||||||..|||:||:|:||:.:
Mouse   712 DTAMRGGRLGVFCFSQENIIWANLRYRCNDTI 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TspNP_001137802.1 EGF_CA 477..513 CDD:284955 15/36 (42%)
TSP3 repeat_1C 563..595 CDD:275367 17/31 (55%)
TSP3 repeat_short 632..654 CDD:275365 12/21 (57%)
TSP_3 656..690 CDD:280556 21/33 (64%)
TSP3 repeat_long 656..690 CDD:275366 21/33 (64%)
TSP3 repeat_short 691..713 CDD:275366 16/21 (76%)
TSP3 repeat_long 714..751 CDD:275365 22/36 (61%)
TSP_3 715..751 CDD:280556 22/35 (63%)
TSP3 repeat_short 752..787 CDD:275366 20/34 (59%)
TSP_3 789..822 CDD:280556 14/32 (44%)
TSP_C 841..1038 CDD:283408 121/196 (62%)
coiled coil 245..286 CDD:293927 10/40 (25%)
TSPcc_insect 245..286 CDD:293927 10/40 (25%)
EGF_CA 343..377 CDD:214542 16/33 (48%)
EGF_CA 421..457 CDD:238011 18/35 (51%)
CompNP_057894.2 COMP N-terminal 21..84 22/103 (21%)
coiled coil 29..71 CDD:293924 10/41 (24%)
TSP-5cc 29..71 CDD:293924 10/41 (24%)
EGF_CA 125..160 CDD:238011 18/35 (51%)
EGF_CA 178..216 CDD:214542 15/37 (41%)
TSP type-3 1 266..298 17/31 (55%)
TSP3 repeat_short 266..298 CDD:275365 17/31 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..341 28/44 (64%)
TSP3 repeat_long 299..334 CDD:275366 22/34 (65%)
TSP_3 300..334 CDD:280556 21/33 (64%)
TSP type-3 3 335..357 12/21 (57%)
TSP3 repeat_short 335..357 CDD:275366 12/21 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 353..501 90/147 (61%)
TSP3 repeat_long 358..393 CDD:275365 21/34 (62%)
TSP_3 395..454 CDD:280556 39/58 (67%)
TSP3 repeat_short 395..416 CDD:275365 15/20 (75%)
TSP3 repeat_long 417..454 CDD:275365 22/36 (61%)
TSP type-3 8 491..526 14/34 (41%)
TSP3 repeat_long 491..522 CDD:275365 13/30 (43%)
TSP_3 492..525 CDD:280556 14/32 (44%)
Mediates cell survival and induction of the IAP family of survival proteins. /evidence=ECO:0000250 525..755 132/219 (60%)
TSP_C 544..741 CDD:283408 121/196 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847609
Domainoid 1 1.000 283 1.000 Domainoid score I1633
eggNOG 1 0.900 - - E1_2CMRF
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74
Inparanoid 1 1.050 764 1.000 Inparanoid score I542
Isobase 1 0.950 - 0 Normalized mean entropy S5849
OMA 1 1.010 - - QHG49685
OrthoDB 1 1.010 - - D120983at2759
OrthoFinder 1 1.000 - - FOG0001167
OrthoInspector 1 1.000 - - otm43939
orthoMCL 1 0.900 - - OOG6_101187
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4962
SonicParanoid 1 1.000 - - X995
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.650

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