DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe3 and NHX1

DIOPT Version :10

Sequence 1:NP_723202.2 Gene:Nhe3 / 33939 FlyBaseID:FBgn0028703 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_198067.1 Gene:NHX1 / 832773 AraportID:AT5G27150 Length:538 Species:Arabidopsis thaliana


Alignment Length:617 Identity:180/617 - (29%)
Similarity:287/617 - (46%) Gaps:138/617 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LDAKATLNH-RIQSLDLLVFVFLLALTVLTIWLFKHHRVSWLHETGLAVIYGLIVGAIIRYAGTS 88
            |.:.:|.:| .:.:|:|  ||.||...::...|.:.:|  |::|:..|::.||         ||.
plant     9 LPSLSTSDHASVVALNL--FVALLCACIVLGHLLEENR--WMNESITALLIGL---------GTG 60

  Fly    89 ATLVHMQVEPQGVPTYSDKLPPDTLWFRYPVNQTNGTKPPEGIKTYAYVFRGQVHDVDENEIDLK 153
            .|::.:.                                 :|..::..|                
plant    61 VTILLIS---------------------------------KGKSSHLLV---------------- 76

  Fly   154 ATFDPEVFFNIILPPIIFYAGYSLKKKYFFRNLGAILTFAIVGTTLSAFLIGGFMYGCVKLMPKY 218
              |..::||..:||||||.||:.:|||.||||...|:.|..|||.:|..:|.   .|..:...|.
plant    77 --FSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFVTIMLFGAVGTIISCTIIS---LGVTQFFKKL 136

  Fly   219 LSSSFTFLDSLYFGALISPTDPLTILAIFNDLRVDVNLYALVLGESVLNDAVAIVLSGAIQNYG- 282
            ...:|...|.|..||:.:.||.:..|.:.|.....: ||:||.||.|:|||.::|:..|||::. 
plant   137 DIGTFDLGDYLAIGAIFAATDSVCTLQVLNQDETPL-LYSLVFGEGVVNDATSVVVFNAIQSFDL 200

  Fly   283 EHYSNTGEFETTAFLRSLSDFFSIFLLSLMIGAAMGCLTA-LMTKFTRVRDFPLLESALFVLMSY 346
            .|.::...|..      |.:|..:||||.::|||.|.::| ::.|....|.....|.||.:||:|
plant   201 THLNHEAAFHL------LGNFLYLFLLSTLLGAATGLISAYVIKKLYFGRHSTDREVALMMLMAY 259

  Fly   347 STFLLAEATELTGVVAVLFCGICQAHYTYNNLSEDSRQRTKQIFELLNFLAENFIFSYIGV---- 407
            .:::|||..:|:|::.|.||||..:|||::|::|.||..||..|..|:||||.|||.|:|:    
plant   260 LSYMLAELFDLSGILTVFFCGIVMSHYTWHNVTESSRITTKHTFATLSFLAETFIFLYVGMDALD 324

  Fly   408 -----SMFTFPKHHFDAGFIITAFICAAIGRAVNVYPLSWLLNIKRK---PKISTNFQHMLFFAG 464
                 |:...|........|:...:  .:|||..|:|||:|.|:.:|   .||:.|.|.:::::|
plant   325 IDKWRSVSDTPGTSIAVSSILMGLV--MVGRAAFVFPLSFLSNLAKKNQSEKINFNMQVVIWWSG 387

  Fly   465 L-RGAMSFALA----IRNTVSDER--QTMLTATSLIVIFTVVIQGGAANFLLNWLKIPVGVDDET 522
            | |||:|.|||    .|...:|.|  ..|:|:|..:.:|:.|:.|.....|:::| :|       
plant   388 LMRGAVSMALAYNKFTRAGHTDVRGNAIMITSTITVCLFSTVVFGMLTKPLISYL-LP------- 444

  Fly   523 EQLNNYQVHSVYNSMDNSHPQTSDGYLQD----VEGGGVNRNKMRLSGGTDTNLDTPVDGTNGSL 583
                 :|..:.....|::.|::....|.|    :|..| |.|..|            .|...|.|
plant   445 -----HQNATTSMLSDDNTPKSIHIPLLDQDSFIEPSG-NHNVPR------------PDSIRGFL 491

  Fly   584 GGASGGRRRNSHEKAILARIWGNFDTKYMKPL 615
            ...:    |..|      ..|..||..:|:|:
plant   492 TRPT----RTVH------YYWRQFDDSFMRPV 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe3NP_723202.2 Na_H_Exchanger 155..>531 CDD:470090 140/396 (35%)
NHX1NP_198067.1 Na_H_Exchanger 44..>468 CDD:470090 154/510 (30%)

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