DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nhe3 and Nhe2

DIOPT Version :10

Sequence 1:NP_723202.2 Gene:Nhe3 / 33939 FlyBaseID:FBgn0028703 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster


Alignment Length:687 Identity:169/687 - (24%)
Similarity:282/687 - (41%) Gaps:152/687 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DAKATLNHRIQSLDLLVFVFLLALT--VLTIWLFK-------HHRVSWLH----ETGLAVIYGLI 77
            :||....|:::...|....|....|  ::.||:..       .|....||    |:.|.::.|::
  Fly   171 NAKGDEGHKMERYPLSSVDFARVKTPFIIGIWILSASIAKIGFHMTPKLHLIFPESCLLIVVGVV 235

  Fly    78 VGAIIRYAGTSATLVHMQVEPQGVPTYSDKLPPDTLWFRYPVNQTNGTKPPEGIKTYAYVFRGQV 142
            :|.::.:.      ..:.|.|         |.|:|                              
  Fly   236 IGVVLYFC------TDVAVSP---------LTPNT------------------------------ 255

  Fly   143 HDVDENEIDLKATFDPEVFFNIILPPIIFYAGYSLKKKYFFRNLGAILTFAIVGTTLSAFLIGGF 207
                              ||..:|||||..|||.:..:.||.|||.||..|:|||..:...|||.
  Fly   256 ------------------FFFYMLPPIILDAGYFMPNRLFFDNLGTILLMAVVGTIFNIATIGGS 302

  Fly   208 MYGCVKLMPKYLSSSFTFLDSLYFGALISPTDPLTILAIFNDLRVDVNLYALVLGESVLNDAVAI 272
            :|.|.|:.....|.:...:|...|.:|||..||:.:||:|.::.|:..||.:|.|||:|||||.:
  Fly   303 LYACGKMGIYGESETPGLMDVFLFASLISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTV 367

  Fly   273 VLSGAIQNYGEHYSNTGEFETTAFLRSLSDFFSIFLLSLMIGAAMGCLTALMTKFT-RVRDFPLL 336
            |:...:::|.|  ....:.........:..||.:.|....||...|.||.|:|:|| .||   ::
  Fly   368 VMYHMMESYNE--IGLDKIIAQDIASGVGSFFVVALGGTAIGIIWGFLTGLVTRFTDHVR---VI 427

  Fly   337 ESALFVLMSYSTFLLAEATELTGVVAVLFCGICQAHYTYNNLSEDSRQRTKQIFELLNFLAENFI 401
            |.....:|:|..:|.||...::|::|:.||||...:|..:|:|:.|....|...::|:..||..|
  Fly   428 EPIFIFVMAYLAYLNAEIFHMSGILAITFCGITMKNYVESNISQKSHTTVKYALKMLSSSAETII 492

  Fly   402 FSYIGVSMFTFPKHHFDAGFIITAFICAAIGRAVNVYPLSWLLNIKRKPKISTNFQHMLFFAGLR 466
            |.::||:... ..|.::..|::......::.|.:.|..||.|.|..|..|:|...|.::.:.|||
  Fly   493 FMFLGVATVN-NMHVWNTWFVVLTIAFCSVFRVIGVILLSALANRFRLHKLSRVDQFVMSYGGLR 556

  Fly   467 GAMSFALA--IRNTVSDERQTMLTATSLIVIFTVVIQGGAANFLLNWLKIP-------------- 515
            ||::|||.  :...|..::...:|.|..::.|||.:||.....|:..|.:.              
  Fly   557 GAVAFALVLLVDENVVKQKNMFVTTTIAVIYFTVFLQGITIKPLVKILNVKRANKRKPTMNERIH 621

  Fly   516 --------VGVDDETEQLNNYQVHSVYNSMDN-------------SHPQTSDGYLQDVEGGGVNR 559
                    .|::|...:..||.|...:...||             :.|:..:.|           
  Fly   622 ERFMDHLMAGIEDIVGKTGNYNVRDKFKRFDNRFIRPLLIRDLKGAEPKIIETY----------- 675

  Fly   560 NKMRLSGGTDTNLDTPVDGTNGSLGGASGGRRRNSHEKAILARIWGNFDTKYM--KPLLTHSRPT 622
            :|:.:....:.....|  .|.|.:.|...           ::.::.|:...|:  .|.||:...|
  Fly   676 SKLTMRDAMEVMRRNP--STIGQMTGTES-----------MSALFRNYTNNYIGGSPSLTNLDNT 727

  Fly   623 LLETLPVC---CNPIARLLTTTQ---QLTQDGSEFRR 653
            ....|.:.   .||..:.||..:   .|.::...:||
  Fly   728 CSRNLDMAELDYNPSKKDLTDARIHHLLAEELKPYRR 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe3NP_723202.2 Na_H_Exchanger 155..>531 CDD:470090 125/400 (31%)
Nhe2NP_001137851.1 Na_H_Exchanger 189..704 CDD:470090 151/607 (25%)

Return to query results.
Submit another query.