DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe3 and Nhe1

DIOPT Version :10

Sequence 1:NP_723202.2 Gene:Nhe3 / 33939 FlyBaseID:FBgn0028703 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_608491.3 Gene:Nhe1 / 33167 FlyBaseID:FBgn0026787 Length:649 Species:Drosophila melanogaster


Alignment Length:689 Identity:204/689 - (29%)
Similarity:310/689 - (44%) Gaps:162/689 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 TDTDIALDAKATLNHRIQSLDLLVFVFLLALTVLTIWLFKHHRVSWLHETGLAVIYGLIVGAIIR 83
            ||..: :|:.|.......||.|...:.::.|.:|.|.........:|.|:.:.|..|..:|..:.
  Fly    84 TDPPL-IDSHAVEQEHNSSLSLFFVICVIMLGILLIHSMLQTGFQYLPESIVVVFLGAFIGLSLN 147

  Fly    84 YAGTSATLVHMQVEPQGVPTYSDKLPPDTLWFRYPVNQTNGTKPPEGIKTYAYVFRGQVHDVDEN 148
                                                                 |..||.......
  Fly   148 -----------------------------------------------------VMSGQNGSWKRE 159

  Fly   149 EIDLKATFDPEVFFNIILPPIIFYAGYSLKKKYFFRNLGAILTFAIVGTTLSAFLIGGFMYGCVK 213
            |:     |.|..||.::||||||.:||:|.|..||:|:|:||.|||.|||:||.:||..:|   .
  Fly   160 EV-----FSPMGFFLVLLPPIIFESGYNLHKGNFFQNIGSILVFAIFGTTISALVIGAGIY---L 216

  Fly   214 LMPKYLSSSFTFLDSLYFGALISPTDPLTILAIFNDLRVDVNLYALVLGESVLNDAVAIVLSGAI 278
            |....::...:|.:|..||:|||..||:..:|||:.|.||..|..||.|||:||||::|||:.:|
  Fly   217 LGLGEVAFRLSFSESFAFGSLISAVDPVATVAIFHALDVDPILNMLVFGESILNDAISIVLTASI 281

  Fly   279 QNYG--EHYSNTGEFETTAFLRSLSDFFSIFLLSLMIGAAMGCLTALMTKFTRVRDFPLLESALF 341
            ....  ...::|||    |...:|..|.::|..|..||.....::||:.|...:|..|.||.|:.
  Fly   282 TQSANVNAEASTGE----AMFSALKTFCAMFFASAGIGVIFALISALLLKHIDLRKHPSLEFAMM 342

  Fly   342 VLMSYSTFLLAEATELTGVVAVLFCGICQAHYTYNNLSEDSRQRTKQIFELLNFLAENFIFSYIG 406
            ::.:|:.::|||...|:|::|:|||||..:|||:.|||..::...:|....|.|:||..:|:|:|
  Fly   343 LMFTYAPYVLAEGIHLSGIMAILFCGIVMSHYTHFNLSTVTQITMQQTMRTLAFIAETCVFAYLG 407

  Fly   407 VSMFTFPKHHFDAGFIITAFICAAIGRAVNVYPLSWLLNIKRKPKISTNFQHMLFFAGLRGAMSF 471
            :::|:| ||..:..|:|.|.:...||||.|::||::|:|..|:.||:...|.:::|:|||||:|:
  Fly   408 LAIFSF-KHQVELSFVIWAIVLCLIGRACNIFPLAFLVNKFREHKINNKMQFIMWFSGLRGAISY 471

  Fly   472 ALAIR-NTVSDE-RQTMLTATSLIVIFTVVIQGGAANFLLNWLKIPVGVDDETEQLNNYQVHSVY 534
            ||::. |..|.| |..::|.|.:||:||.::.||:...||.:||                     
  Fly   472 ALSLHLNLDSQEKRHVIITTTLIIVLFTTLVLGGSTMPLLKYLK--------------------- 515

  Fly   535 NSMDNSHPQTSDGYLQDVEGGGVNRNKMRLSGGTDTNLDTPVDGTNGSLGGASGGRRRNSHEKAI 599
                       .|..:...|.|.|..:   .||.          .|||      ||:|:......
  Fly   516 -----------PGKKRRARGSGRNAAE---EGGR----------RNGS------GRKRSKSISLS 550

  Fly   600 LARIW---------------------------GNFDTKYMKPLLTHSRPTLLETLPVCCNPIARL 637
            ..|.|                           |..|.||..|..|  |....:.|..|.:.:|  
  Fly   551 KTREWGQAIDSEHLSELTEEEDVTFTQARDRFGRMDRKYFIPFFT--RRFNSQELHECKSQMA-- 611

  Fly   638 LTTTQQLTQDGSEFRRVDS-DSDICIDNDTGNGLSQDGS 675
                 .||....:..||.. |||   ::|...||:...|
  Fly   612 -----DLTNKWYQAIRVSPLDSD---ESDEEIGLAASTS 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe3NP_723202.2 Na_H_Exchanger 155..>531 CDD:470090 150/379 (40%)
Nhe1NP_608491.3 Na_H_Exchanger 111..597 CDD:470090 182/604 (30%)

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