DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe3 and pbo-4

DIOPT Version :10

Sequence 1:NP_723202.2 Gene:Nhe3 / 33939 FlyBaseID:FBgn0028703 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_509830.2 Gene:pbo-4 / 181285 WormBaseID:WBGene00003943 Length:783 Species:Caenorhabditis elegans


Alignment Length:448 Identity:134/448 - (29%)
Similarity:221/448 - (49%) Gaps:60/448 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 FDPEVFFNIILPPIIFYAGYSLKKKYFFRNLGAILTFAIVGTTLSAFLIGG--FMYGCVKLMPKY 218
            |..:|||..:|||||..:.||||.:.|..|:|.||.:|:|||.|:..|:..  .:...|.:|.||
 Worm   165 FKSKVFFFYLLPPIILESAYSLKDRAFIENIGTILLYAVVGTILNIVLLAAALLILIWVGIMGKY 229

  Fly   219 LSSSFTFLDSLYFGALISPTDPLTILAIFNDLRVDVNLYALVLGESVLNDAVAIVLSGAIQNYGE 283
               :.:.:|.|.|.:|::..||:.:||:|.::.|:..||.:|.|||:.||||.||.         
 Worm   230 ---NLSVMDILTFASLVAAVDPVAVLAVFQEVGVNKMLYFMVFGESLFNDAVTIVC--------- 282

  Fly   284 HYSNTGEFETT-------AFLRSLSDFFSIFLLSLMIGAAMGCLTALMTKFTRVRDFPLLESALF 341
             |:...||:|.       .||..|| |..:.:..|:||...|.:::.:||||  .|..::|..:.
 Worm   283 -YNLAIEFQTLPDFTWYHGFLGLLS-FLCVSIGGLIIGLICGAISSFVTKFT--TDVRVVEPVVL 343

  Fly   342 VLMSYSTFLLAEATELTGVVAVLFCGICQAHYTYNNLSEDSRQRTKQIFELLNFLAENFIFSYIG 406
            ..|:|..:|.:|....:|::|::.||:.|.||...|:|..|......|.::.:.|.|:.||..:|
 Worm   344 FGMAYLAYLGSEMFHFSGIIALIACGLFQTHYACCNISYKSFTSVMYITKVCSTLCESLIFIILG 408

  Fly   407 VSM------FTFPKHH-FDAGFIITAFICAAIGRAVNVYPLSWLLN-----IKRKPKISTNFQHM 459
            |.:      |....|. |.|   ::..:|..:...|..: |::.:|     ::.   ||...|.:
 Worm   409 VMLVNEREWFWTDWHPVFSA---VSVVLCVVVRFGVTFF-LTYFVNQFTGGVRH---ISFQEQFI 466

  Fly   460 LFFAGLRGAMSFALAIRNTVS-DERQTMLTATSLIVIFTVVIQGGAANFLLNWLKIPVGVDDETE 523
            :.:.|||||:||:|....:.: |.:.|||.||..:::||.:|||......:.||.|.:...::..
 Worm   467 MSYGGLRGAVSFSLVFMISANPDVKNTMLGATYAVILFTNIIQGSTIKLFVKWLNIRLAKKEDHF 531

  Fly   524 QL----NNYQVHSVYN-----------SMDNSHPQTSDGYLQDVEGGGVNRNKMRLSG 566
            :|    ||..|..:..           |:.|...:.|..|::.:.......||.:..|
 Worm   532 RLFIEFNNGMVQHLSQGIEDLCGDKSLSLINRMSELSKKYVRPLLEKNYTANKAKKEG 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe3NP_723202.2 Na_H_Exchanger 155..>531 CDD:470090 126/400 (32%)
pbo-4NP_509830.2 Na_H_Exchanger 101..604 CDD:470090 134/448 (30%)

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