DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe3 and slc-9B.1

DIOPT Version :10

Sequence 1:NP_723202.2 Gene:Nhe3 / 33939 FlyBaseID:FBgn0028703 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_509724.1 Gene:slc-9B.1 / 181236 WormBaseID:WBGene00009617 Length:516 Species:Caenorhabditis elegans


Alignment Length:471 Identity:79/471 - (16%)
Similarity:161/471 - (34%) Gaps:142/471 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 VNQTNGTKPPEGIKTYAYVFRGQVHDVDENEIDLKATFDP-----------------EVFFNIIL 166
            ||..|.|.....:::...:|...|..:...:|.......|                 :.||  :.
 Worm    53 VNPVNATNEDVTVRSIFVIFILLVAGIFAAKISKALRLPPLFGCLALGIIIKNITVFDQFF--VF 115

  Fly   167 PP-------------IIFYAGYSLKKKYFFRN------LGAILTFA-IVGTTLSAFLIGGFMYGC 211
            ||             ||...|.:....:.:.|      :|.:.... |:..|::::.|       
 Worm   116 PPFVETMIRKVALVMIIVRWGLATDIHFLYENALMPVTIGLVTAIGEIIAVTIASYFI------- 173

  Fly   212 VKLMPKYLSSSFTFLDSLYFGALISPTDP-LTILAIFND--------LRVDVNLYALVLGESVLN 267
                     .:.:|:.|::...::....| :|:.|:.|.        .|:..|:.|:...:::..
 Worm   174 ---------LNISFVMSIFCALILVTVSPAVTVPAMINFKEKQLGSLKRIPENILAICCVDNLFC 229

  Fly   268 DAVAIVLSGAIQNYGEHYSNTGEFETTAFLRSLSDFFSIFLLSLMIGAAMGCLTALM-------- 324
            ..:.:|||..|       .......||..|.:.|..|             ||:..::        
 Worm   230 VILFMVLSSII-------FTDAPIATTILLNAGSIVF-------------GCIGGIVLGWILWRF 274

  Fly   325 -------TKFTRVRDFPLLESALFVLMSYSTFLLAEATELTGVVAVLFCGICQAHYTYNNLSEDS 382
                   |:|.|:    .|...:.:.:...|:|:..:  .:|.:|.|......|    .....|:
 Worm   275 PRSDAPHTQFARI----TLLGTICIAVVIGTYLIKYS--CSGFLAALITSAMSA----MQWKADN 329

  Fly   383 RQRTKQIFELLNFLAENF----IFSYIGVSMFTFPKHHFDAGFII--TAFIC---AAIGRAVN-- 436
            :::.:.:.....::.::|    :|..:|:.        ||...:.  ..|:|   .|||..|.  
 Worm   330 KEKLECVESTYKYIWDSFALPLLFICLGMK--------FDCSTLTWEIVFLCIAVIAIGLLVRTI 386

  Fly   437 ---VYPLSWLLNIKRKPKISTNFQHMLFFAGLRGAMSFALAIRNT----VSDERQTMLTATSLIV 494
               :..||..:|.|.:..::.:   :|..|..:..::..|.:..|    ::.:...:|.|..|.|
 Worm   387 LVMLVTLSSHINFKEQIVVALS---LLPRATFQADLAPTLLLMATPFPDMAKDAALILKAAILSV 448

  Fly   495 IFTVVIQGGAANFLLN 510
            :.|..|    .:.|||
 Worm   449 LITAPI----FDILLN 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe3NP_723202.2 Na_H_Exchanger 155..>531 CDD:470090 72/435 (17%)
slc-9B.1NP_509724.1 NhaP 68..>454 CDD:439796 71/444 (16%)

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