DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe3 and nhx-4

DIOPT Version :10

Sequence 1:NP_723202.2 Gene:Nhe3 / 33939 FlyBaseID:FBgn0028703 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_001024562.1 Gene:nhx-4 / 180964 WormBaseID:WBGene00003732 Length:749 Species:Caenorhabditis elegans


Alignment Length:753 Identity:182/753 - (24%)
Similarity:292/753 - (38%) Gaps:186/753 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SATDTDIALDAKA------------TLNHRIQSLDL--------LVFVFLLALTVLTIWLFKHHR 61
            :.::||.::||:.            ...|.:..:.:        |.||||:.|..|.     ...
 Worm    58 NTSETDESMDAEGEWVQSAPPEEIEEAKHLLDPVHVDFEHTHKPLAFVFLIILVTLA-----KPT 117

  Fly    62 VSW-----LHETGLAVIYGLIVGAIIRYAGTSATLVHMQVEPQGVPTYSDKLPPDTLWFRYPVNQ 121
            :.|     |.|:.:.::||:::...::        ..|:::|                       
 Worm   118 LHWPVLRKLPESVVLMLYGVLMATAVK--------ALMRIDP----------------------- 151

  Fly   122 TNGTKPPEGIKTYAYVFRGQVHDVDENEIDLKATFDPEVFFNIILPPIIFYAGYSLKKKYFFRNL 186
                              ||:              |..:||.|:||.|:..||.|::||.|...|
 Worm   152 ------------------GQL--------------DTFMFFMILLPAIVNDAGLSMQKKEFTIAL 184

  Fly   187 GAILTFAIVGTTLSAFLIGGFMYGCVKLMPKYLSSSFT--FLDSLYFGALISPTDPLTILAIFND 249
            ..||.||:|||.:.|.|:...|||...:.      ||.  ||....|..|||..||:::|:.|.:
 Worm   185 PKILLFAVVGTVVHALLLAATMYGIEPIF------SFKPGFLHLFVFATLISAVDPVSVLSTFAE 243

  Fly   250 LRVDVNLYALVLGESVLNDAVAIVLSGAIQNYGEHYSNTGEFET-TAFLRS-LSDFFSIFLLSLM 312
            |.|..:|:.|:.|||:.||||.|||.....|..:....:.|..| |:.:.| :..|..:....|:
 Worm   244 LDVKKSLFILIFGESLCNDAVTIVLYRTSINVIKTSDASDEMLTITSVVGSCVVQFMIVCGFGLL 308

  Fly   313 IGAAMGCLTALMTK--FTRVRDFPLLESALFVLMSYSTFLLAEATELTGVVAVLFCGICQAHYTY 375
            .||.:|.....:.|  .....:.|:.:    :...|..:||||....:|::|.:.|....::|..
 Worm   309 CGAVVGFAGVFIMKNMVGHQMNQPIFQ----LFCPYLAYLLAETGHYSGILASILCAAIMSYYMA 369

  Fly   376 NNLSEDSRQRTKQIFELLNFLAENFIFSYIGVSMFTFPKHHFDAGFIITAFICAAIGRAVNVYPL 440
            .|:..:.........:..:.|:|:.||.|:|||:.:: .|.||..||.....|..:.|.:....|
 Worm   370 ANMCVEMEFAAFTFSKTGSSLSESCIFFYLGVSLVSY-NHEFDFYFIAVTVFCCTLYRFLVTCTL 433

  Fly   441 SWLLNI--KRKPKISTNFQHMLFFAGLRGAMSFALAIRNTVSDER----QTMLTATSLIVIF-TV 498
            |...|:  ..|.:|....|.::..||:|||:.|.|.   .:.|||    :.....|:|.:|| |.
 Worm   434 SAFYNLFASEKNRIPFTDQLVVTHAGIRGAVCFGLV---QIIDERIIPAKPYFVTTTLAMIFVTS 495

  Fly   499 VIQGGAANFLLNWLKIPVGVDDETEQ-----------LNNYQVHSVYNSMDNSHPQTSDGYLQDV 552
            ::||....|::..||||  .||.|:|           ||:..:.....| :|::..|.:.:    
 Worm   496 ILQGCTIKFVMKCLKIP--GDDGTKQKDPKALRWLTHLNDKYIKKFLVS-ENTYLPTDETF---- 553

  Fly   553 EGGGVNRN-------KMRLSGGTDTNLDTPVDGTNGSLGGASGGRRRNSHEKAILARIWGNFDTK 610
                  ||       ...|..|..::.|....|........|.||      ..|....:||.:.:
 Worm   554 ------RNLGLPKAVSTALRIGERSHTDLQRHGEVSHTPAPSVGR------PTIAPFDFGNMEEE 606

  Fly   611 YMKPLLTHSRPTLLETLPVCCNPIARLLT-------------TTQQLTQDGSEFRRVDSDSDICI 662
            ..:...|..|           .|:||..|             |...||...|..:|...|.....
 Worm   607 NNRLPSTGRR-----------TPVARSQTRYSRHFIYAIPNETDNYLTCPVSASKRPPFDPSQVY 660

  Fly   663 DNDTGNGLSQDGSGAAPGVGRR-NSLSRS--VHLNEAN 697
            .:.  |.:|..|...|....|| ||:|.:  :.|.:.|
 Worm   661 QHQ--NTISNPGDDRARCYNRRHNSMSGADEMELKQLN 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe3NP_723202.2 Na_H_Exchanger 155..>531 CDD:470090 123/399 (31%)
nhx-4NP_001024562.1 b_cpa1 94..637 CDD:273294 160/654 (24%)

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