Protein Alignment cort and CDC20.4

DIOPT Version :10

• Sequence 1: NP_523494.1
• Gene: cort / 33937
• FlyBaseID: FBgn0000351
• Length: 483
• Species: Drosophila melanogaster
• Sequence 2: NP_198042.1
• Gene: CDC20.4 / 832748
• AraportID: AT5G26900
• Length: 444
• Species: Arabidopsis thaliana
• Alignment Length: 483
• Identity: 102/483 - (21%)
• Similarity: 184/483 - (38%)
• Gaps: 131/483 - (27%)

  Fly    52 VGERFIPNRFERENIEFNLKYIGKRKERDILETGVTLT---------------ASYWRQSGFISN 101
            |.|.|:|.:..::|::   ::|..|..:|.......||               .:|..|...:.|
plant    11 VPEHFLPRKLSKQNLD---RFIPNRSAKDFDFANYALTQGSKRNLDEVTSASRKAYMTQLAVVMN 72

  Fly   102 INRTFGIGERRLFQFSSQQGTRSRVVDNDSADSDWPCNPRARPYAIQNATH--EMPGICSPVDYN 164
            .|||      |:..|.::..:......:||...: |...:.|.|..||:..  :.||:......|
plant    73 QNRT------RILAFRNKPKSLLSTNHSDSPHQN-PKPVKPRRYIPQNSERVLDAPGLRDDFSLN 130

  Fly   165 MMDWSSGGMVAMSSGQDVMLW----RNLDESTMVFSVESP-TSLKYSPDGKHLAIGCMDRNYPVL 224
            ::||.|..::|::.|..|.||    .:..|...:...:.| ||:.::.||..||:| :|.:  .:
plant   131 LLDWGSANVLAIALGDTVYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVG-LDNS--EV 192

  Fly   225 DLWEVRSPTEFLVSYRKLFFKSMGY---ISCIEWSHDGKEVICGTQCGVIIVLAMPTLNTLMQLR 286
            .||:       .||.|::.....|:   :..:.|  |...:..|...|.|:       |..:::|
plant   193 QLWD-------CVSNRQVRTLRGGHESRVGSLAW--DNHILTTGGMDGKIV-------NNDVRIR 241

  Fly   287 E--------HRHTVKKMKFAPTHKYFASSDTDGKIFIFDAVL------------------KVRLL 325
            .        |...|..:|::.:....||...|..:.|:|..|                  .||.|
plant   242 SSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRAL 306

  Fly   326 KL---------------DGRSIVFDWHPWTGEDL-AVAERSPASIFIFNIPRRQFVASYRRRDDR 374
            ..               ||: |.| |:..||..| :|...|.....:::...|:.::|:
plant   307 AWCPFQASLLATGGGVGDGK-IKF-WNTHTGACLNSVETGSQVCSLLWSQSERELLSSH------ 363

  Fly   375 IVIKTLTYSKITGELLVNVIRRDDADLAVCEILVLASLNRVVDLMSHQDRGTLFLMWNPDGTKIA 439
                ..|.:::|                   :....|::::.:|..|..| .||:..:|:|..:|
plant   364 ----GFTQNQLT-------------------LWKYPSMSKMAELNGHTSR-VLFMAQSPNGCTVA 404

  Fly   440 TGGLDDTFSLWNFF---PTYKREAILRK 464
            :...|:...|||.|   |...::|..:|
plant   405 SAAGDENLRLWNVFGEPPKTTKKAASKK 432

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cort	NP_523494.1	WD40	<168..451	CDD:441893	67/332 (20%)
		WD40 repeat	201..244	CDD:293791	13/42 (31%)
		WD40 repeat	251..287	CDD:293791	6/35 (17%)
		WD40 repeat	292..326	CDD:293791	10/51 (20%)
		WD40 repeat	334..369	CDD:293791	9/35 (26%)
		WD40 repeat	377..419	CDD:293791	3/41 (7%)
		WD40 repeat	427..466	CDD:293791	13/41 (32%)
CDC20.4	NP_198042.1	WD40	<140..417	CDD:441893	66/327 (20%)
		WD40 repeat	172..209	CDD:293791	13/46 (28%)
		WD40 repeat	214..246	CDD:293791	7/40 (18%)
		WD40 repeat	256..296	CDD:293791	7/39 (18%)
		WD40 repeat	303..339	CDD:293791	10/37 (27%)
		WD40 repeat	347..385	CDD:293791	5/66 (8%)
		WD40 repeat	391..415	CDD:293791	6/23 (26%)