Protein Alignment cort and CCS52A2

DIOPT Version :10

• Sequence 1: NP_523494.1
• Gene: cort / 33937
• FlyBaseID: FBgn0000351
• Length: 483
• Species: Drosophila melanogaster
• Sequence 2: NP_192929.2
• Gene: CCS52A2 / 826799
• AraportID: AT4G11920
• Length: 475
• Species: Arabidopsis thaliana
• Alignment Length: 480
• Identity: 102/480 - (21%)
• Similarity: 172/480 - (35%)
• Gaps: 136/480 - (28%)

  Fly    54 ERFIPNRFERENIEFNLKYIGKRKERDILETGVTLTASYWRQSGF------ISNINRTFGIGERR 112
            :||||:|.......|:|......| :|..|.|....||..:.:.|      .|::...|. ....
plant    53 DRFIPSRSGSNFALFDLASSSPNK-KDGKEDGAGSYASLLKTALFGPVTPEKSDVVNGFS-PSGN 115

  Fly   113 LFQFSSQQGTRSRV---VDNDSADSDWPC---NPR---ARPYAIQNATHEMPGICSPVDYNMMDW 168
            :|:|.::......:   .|:|......|.   :||   ..||.:.:|    |.:......|::||
plant   116 IFRFKTETQRSLNLYPPFDSDVVSGVSPSPVKSPRKILRSPYKVLDA----PALQDDFYLNLVDW 176

  Fly   169 SSGGMVAMSSGQDVMLWRNLDESTMVFSV------ESPTSLKYSPDGKHLAIGCMDRNYPVLDL- 226
            |:..::|:..|..|.||...  |:.|..:      |:..|:.::..|.|||||.......:.|:
plant   177 SAQNVLAVGLGNCVYLWNAC--SSKVTKLCDLGVDETVCSVGWALRGTHLAIGTSSGTVQIWDVL 239

  Fly   227 -------------------W-----------------EVRSPTEFLVSYRKLFFKSMGYIS--C- 252
                               |                 ::|:..:.:       .|..|:.|  |
plant   240 RCKNIRTMEGHRLRVGALAWSSSVLSSGSRDKSILQRDIRTQEDHV-------SKLKGHKSEICG 297

  Fly   253 IEWSHDGKEVICGTQCGVIIVLAMPTLNTLMQLREHRHTVKKMKFAPTHKYFASSDTDGKIFIFD 317
            ::||.|.:|:..|.....:.|....:...:::..||...||.:.::|.|
plant   298 LKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHH---------------- 346

  Fly   318 AVLKVRLLKLDG----RSIVFDWHPWTGEDL-AVAERSPASIFIFNIPRRQFVASYRRRDDRIVI 377
                ..||...|    |.|.| |:..|...| .|...|.....:::....:.|:::....::|::
plant   347 ----FGLLASGGGTADRCIRF-WNTTTNTHLNCVDTNSQVCNLVWSKNVNELVSTHGYSQNQIIV 406

  Fly   378 -KTLTYSKITGELLVNVIRRDDADLAVCEILVLASLNRVVDLMSHQDRGTLFLMWNPDGTKIATG 441
             |..|.||:                              ..|..|..| .|:|..:|||..|.||
plant   407 WKYPTMSKL------------------------------ATLTGHSYR-VLYLAVSPDGQTIVTG 440

  Fly   442 GLDDTFSLWNFFPTYKREAILRKQE 466
            ..|:|...||.||:.|.::  |:.|
plant   441 AGDETLRFWNVFPSPKSQS--RESE 463

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cort	NP_523494.1	WD40	<168..451	CDD:441893	66/334 (20%)
		WD40 repeat	201..244	CDD:293791	10/79 (13%)
		WD40 repeat	251..287	CDD:293791	8/38 (21%)
		WD40 repeat	292..326	CDD:293791	5/33 (15%)
		WD40 repeat	334..369	CDD:293791	7/35 (20%)
		WD40 repeat	377..419	CDD:293791	4/42 (10%)
		WD40 repeat	427..466	CDD:293791	16/38 (42%)
CCS52A2	NP_192929.2	WD40	<181..451	CDD:441893	65/330 (20%)
		WD40 repeat	212..249	CDD:293791	8/36 (22%)
		WD40 repeat	255..290	CDD:293791	3/41 (7%)
		WD40 repeat	295..331	CDD:293791	7/35 (20%)
		WD40 repeat	338..373	CDD:293791	11/55 (20%)
		WD40 repeat	381..419	CDD:293791	6/67 (9%)
		WD40 repeat	425..451	CDD:293791	11/25 (44%)