DRSC/TRiP Functional Genomics Resources

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Protein Alignment cort and Fzr1

DIOPT Version :9

Sequence 1:NP_001260144.1 Gene:cort / 33937 FlyBaseID:FBgn0000351 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_062731.1 Gene:Fzr1 / 56371 MGIID:1926790 Length:493 Species:Mus musculus


Alignment Length:521 Identity:121/521 - (23%)
Similarity:191/521 - (36%) Gaps:162/521 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 GERFIPNR--------FERENIEFNLKYIGKRKERDILETGVTLTASYWRQSGFISNINRTFGIG 109
            |:||||:|        |.|.| |........||.:|..........:|   |..:.  |...|.|
Mouse    45 GDRFIPSRAGANWSVNFHRIN-ENEKSPSQNRKAKDATSDNGKDGLAY---SALLK--NELLGAG 103

  Fly   110 ----------ERR----------LFQFSSQQGTRSRVVDND-SADSDWPCNPRAR---------- 143
                      :||          ||.:|......|....|| |..|..|.:.:::          
Mouse   104 IEKVQDPQTEDRRLQPSTPEHKGLFTYSLSSKRSSPDDGNDVSPYSLSPVSNKSQKLLRSPRKPT 168

  Fly   144 ------PYAIQNATHEMPGICSPVDYNMMDWSSGGMVAMSSGQDVMLW--------RNLDESTMV 194
                  |:.:.:|    |.:......|::||||..::::..|..|.||        |..|     
Mouse   169 RKISKIPFKVLDA----PELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCD----- 224

  Fly   195 FSVE--SPTSLKYSPDGKHLAIGCMDRNYPVLDLWEVRSPTEFLVSYRKLFFKSM--GY---ISC 252
            .|||  |.||:.:|..|..:|:|   .:...:.:|:.       .:.:||   ||  |:   :..
Mouse   225 LSVEGDSVTSVGWSERGNLVAVG---THKGFVQIWDA-------AAGKKL---SMLEGHTARVGA 276

  Fly   253 IEWSHDGKEVICGTQCGVIIV--LAMPTLNTLMQLREHRHTVKKMKFAPTHKYFASSDTDGKIFI 315
            :.|:.|  ::..|::..:|:.  :..|.|.:..:|:.||..|..:|::..|:..||...|.|:.:
Mouse   277 LAWNAD--QLSSGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLV 339

  Fly   316 FD--------------AVLKV--------RLLKLDG----RSIVFDWHPWTGEDLAVAERSPASI 354
            ::              |.:|.        .||...|    |.|.| |:..||:.|...       
Mouse   340 WNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRF-WNTLTGQPLQCI------- 396

  Fly   355 FIFNIPRRQFVASYRRRDDRIVIKTLTYSKITGELLVNVIRRDDADLAVCEILV--LASLNRVVD 417
                             |....:..|.:||...||:      .....:..:|||  ..||.:|..
Mouse   397 -----------------DTGSQVCNLAWSKHANELV------STHGYSQNQILVWKYPSLTQVAK 438

  Fly   418 LMSHQDRGTLFLMWNPDGTKIATGGLDDTFSLWNFFPTYKREAILRKQEQKAKDKCSSLSLYKGI 482
            |..|..| .|:|..:|||..|.||..|:|...||.|          .:.:..|:..|.|:|:..|
Mouse   439 LTGHSYR-VLYLAMSPDGEAIVTGAGDETLRFWNVF----------SKTRSTKESVSVLNLFTRI 492

  Fly   483 R 483
            |
Mouse   493 R 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cortNP_001260144.1 WD40 <166..453 CDD:225201 81/331 (24%)
WD40 166..451 CDD:295369 79/329 (24%)
WD40 repeat 201..244 CDD:293791 9/42 (21%)
WD40 repeat 251..287 CDD:293791 7/37 (19%)
WD40 repeat 292..326 CDD:293791 10/55 (18%)
WD40 repeat 334..369 CDD:293791 5/34 (15%)
WD40 repeat 377..419 CDD:293791 11/43 (26%)
WD40 repeat 427..466 CDD:293791 13/38 (34%)
Fzr1NP_062731.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..51 4/5 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..88 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 105..166 11/60 (18%)
WD 1 182..222 10/39 (26%)
WD40 193..471 CDD:238121 79/329 (24%)
WD 2 227..266 12/51 (24%)
WD40 repeat 232..269 CDD:293791 11/49 (22%)
WD 3 269..306 7/38 (18%)
WD40 repeat 275..311 CDD:293791 7/37 (19%)
WD 4 311..350 9/38 (24%)
WD40 repeat 316..352 CDD:293791 7/35 (20%)
WD 5 353..395 12/42 (29%)
WD40 repeat 359..397 CDD:293791 11/62 (18%)
WD 6 397..438 12/46 (26%)
WD40 repeat 402..440 CDD:293791 11/43 (26%)
WD 7 441..480 15/49 (31%)
WD40 repeat 446..487 CDD:293791 15/50 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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