DRSC/TRiP Functional Genomics Resources

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Protein Alignment cort and fzy

DIOPT Version :10

Sequence 1:NP_523494.1 Gene:cort / 33937 FlyBaseID:FBgn0000351 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_477501.1 Gene:fzy / 34968 FlyBaseID:FBgn0001086 Length:526 Species:Drosophila melanogaster


Alignment Length:537 Identity:120/537 - (22%)
Similarity:192/537 - (35%) Gaps:173/537 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SPNKNS--KLDKKSLTPFKKVRRKNWKQEAAYKSDTSKGQEVSYVGERFIPNR----FERENIEF 68
            :|.|:|  |..|.:.||                |.|..|      |:||||||    ||..:...
  Fly    63 TPGKSSEGKTKKSNTTP----------------SKTPGG------GDRFIPNRAATNFELAHFLV 105

  Fly    69 NLKYIGKRKERDILETGVTLTASYWRQSGFISNINRTFGIGERRLFQFSSQQGTRSRVVD----- 128
            |.....|..|.:...|.              ||.|.:       ..|.|:.:|.|.:::.     
  Fly   106 NKDSGDKSDEENDKATS--------------SNSNES-------NVQASAHKGDRQKLISEVAQV 149

  Fly   129 NDSADSDWPCNPRARPYAIQNATHEMP-----GICSPV------------------------DY- 163
            .||......|.....|.|.:  ||..|     .|.:|:                        || 
  Fly   150 GDSKGGRILCYQNKAPAAPE--THNNPLKVVYSIKTPISTKSGSRYIPTTSERILDAPDFINDYY 212

  Fly   164 -NMMDWSSGGMVAMSSGQDVMLWR----NLDESTMVFSVESPTSLKYSPDGKHLAIGCMDRNYPV 223
             |:||||:..:||::.|..|.||.    |:::.|.....:...||.:..:|:.||||   .:...
  Fly   213 LNLMDWSADNIVAVALGSCVYLWNAQTGNIEQLTEFEEGDYAGSLSWIQEGQILAIG---NSTGA 274

  Fly   224 LDLWEVRSPTEFLVSYRKLFFKSMGYISCIEWSHDGKEVICGTQCGVIIVLAMPTLNTLMQLREH 288
            ::||:...     |...::.......:..:.|  :...|..|::.|.|:       :..::.|||
  Fly   275 VELWDCSK-----VKRLRVMDGHSARVGSLAW--NSFLVSSGSRDGTIV-------HHDVRAREH 325

  Fly   289 R------HT--VKKMKFAPTHKYFASSDTDGKIFIFDAV------------------LKVRLLKL 327
            :      ||  |..:|::...||.||...|..:.::.|.                  ..||.|. 
  Fly   326 KLSTLSGHTQEVCGLKWSTDFKYLASGGNDNLVNVWSAASGGVGTATDPLHKFNDHQAAVRALA- 389

  Fly   328 DGRSIVFDWHPWTGEDLA----VAERSPASIFIFNIPRRQFVASYRRRDDRIVIKTLTYSKITGE 388
                    |.||....||    .|:|   .|..:|:.....:.|.   |.:..:.:|.:|:...|
  Fly   390 --------WCPWQPSTLASGGGTADR---CIKFWNVNNGTLMKSV---DSKSQVCSLLFSRHYKE 440

  Fly   389 LLV------NVIRRDDADLAVCEILVLASLNRVVDLMSHQDRGTLFLMWNPDGTKIATGGLDDTF 447
            |:.      |.:          .|....::.:..||..|..| .|.:..:|||:.:.:.|.|:|.
  Fly   441 LISAHGFANNQL----------TIWKYPTMVKQADLTGHTSR-VLQMAMSPDGSTVISAGADETL 494

  Fly   448 SLWNFF---PTYKREAI 461
            .|||.|   |...::|:
  Fly   495 RLWNCFAPDPLASKKAV 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cortNP_523494.1 WD40 <168..451 CDD:441893 70/322 (22%)
WD40 repeat 201..244 CDD:293791 10/42 (24%)
WD40 repeat 251..287 CDD:293791 5/35 (14%)
WD40 repeat 292..326 CDD:293791 10/51 (20%)
WD40 repeat 334..369 CDD:293791 10/38 (26%)
WD40 repeat 377..419 CDD:293791 7/47 (15%)
WD40 repeat 427..466 CDD:293791 13/38 (34%)
fzyNP_477501.1 WD40 <218..498 CDD:441893 70/322 (22%)
WD40 repeat 256..291 CDD:293791 10/42 (24%)
WD40 repeat 297..332 CDD:293791 8/43 (19%)
WD40 repeat 337..373 CDD:293791 8/35 (23%)
WD40 repeat 386..424 CDD:293791 12/52 (23%)
WD40 repeat 429..467 CDD:293791 7/47 (15%)
WD40 repeat 473..513 CDD:293791 13/39 (33%)

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