DRSC/TRiP Functional Genomics Resources

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Protein Alignment cort and fzy-1

DIOPT Version :9

Sequence 1:NP_001260144.1 Gene:cort / 33937 FlyBaseID:FBgn0000351 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_495051.1 Gene:fzy-1 / 266859 WormBaseID:WBGene00001511 Length:507 Species:Caenorhabditis elegans


Alignment Length:582 Identity:93/582 - (15%)
Similarity:187/582 - (32%) Gaps:214/582 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SVCDSPNKNS-KLDKKSLTPFKKVRRKNWKQEAAYKSDTSKGQEVSYVGERFIPNRFERENIEFN 69
            :|..|..:|. .:.|:.:||.:               :|:.....::||:||:..|.:::.::  
 Worm    14 TVRSSAQQNGLTMRKRDMTPTR---------------NTNLLPNATFVGDRFLGVRLDQDELD-- 61

  Fly    70 LKYIGKRKERDILETGVTLTASYWRQSGFISNINRTF---------GIGERRLFQFSSQQGTRSR 125
                         .....:|:..:...   .|:|.:.         .:....|.|....:.| ..
 Worm    62 -------------HANHLMTSKLYSNK---ENLNNSMSEPNSPEKKSVEGEALKQMMRHKST-GA 109

  Fly   126 VVDNDSAD--------------------------SDWPCNP-----RARPYAIQNATHEM--PGI 157
            :.|.|..|                          ::...||     ::..:..:.||..:  ||:
 Worm   110 LTDADDGDRILCYKKNLAPPPAIGYINQAKVLYSTNSVINPASSVKKSTRHVKETATKVLDGPGL 174

  Fly   158 CSPVDYNMMDWSSGGMVAMSSGQDVMLW-------RNLDESTMVFSVESPTSLKYSPDGKHLAIG 215
            ...:....:||.....||::.|.::.||       :||.|.....:....||:::|.:|:::::|
 Worm   175 TKDLYSRHLDWGCHNWVAVALGHELYLWNTETCVIKNLFEDNAPTNEGLITSVRWSQEGRYISLG 239

  Fly   216 -------CMDRNYPVLDLWEVRSPTEFL----------------VSYRKLFFKSMGY-------- 249
                   ..|.|.|        ..||::                :::||....:.||        
 Worm   240 YASGAVKIYDPNRP--------KTTEYVRELRTLRVGGASRCASIAWRKQGVMTCGYKSGDIVNH 296

  Fly   250 ---------------------ISCIEWSHDGKEVICGTQCGVI-----------IVLAMPTLNTL 282
                                 ::.:|||.|....:.|:.....           .|:..|  ..:
 Worm   297 DVRISQHVVSSWGGDNGHCRDVTALEWSADENMCVSGSSDRTAKIWDGRHVRGSTVIQDP--EPM 359

  Fly   283 MQLREHRHTVKKMKFAPTHKYFASSD---TDGKIFIFDAVLKVRLLKLDGRSIVFDWHPWTGEDL 344
            ..:.||...|:..:|........::.   .||.:.::|  :|.:..|:              .:|
 Worm   360 FTIDEHTGQVRTAQFCSFRDGILATGGGINDGTVKLWD--VKRQFQKV--------------REL 408

  Fly   345 AVAERSPASIFIFNIPRRQFVASYRRRDD---RIVIKTLTYSKITGELLVNVIRRDDADLAVCEI 406
            .|.|.......:||.|..:.:.:   .||   ||......| |::.|                  
 Worm   409 NVCETGGVGGIVFNRPYSEMLTA---SDDGFLRIYRFNANY-KLSHE------------------ 451

  Fly   407 LVLASLNRVVDLMSHQDRGTLFLMWNPDGTKIATGGLDDTFSLWNFFPTYKREAILRKQEQK 468
             :.||...::||:     |:.|       .::..|.:::|..::..|...|...||.:...|
 Worm   452 -IQASNEPIMDLV-----GSPF-------DEVLIGDMEETLKVFQLFNVDKSTNILDRTAPK 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cortNP_001260144.1 WD40 <166..453 CDD:225201 61/362 (17%)
WD40 166..451 CDD:295369 61/360 (17%)
WD40 repeat 201..244 CDD:293791 12/65 (18%)
WD40 repeat 251..287 CDD:293791 7/46 (15%)
WD40 repeat 292..326 CDD:293791 6/36 (17%)
WD40 repeat 334..369 CDD:293791 6/34 (18%)
WD40 repeat 377..419 CDD:293791 6/41 (15%)
WD40 repeat 427..466 CDD:293791 7/38 (18%)
fzy-1NP_495051.1 WD40 <197..490 CDD:225201 57/353 (16%)
WD40 221..484 CDD:295369 51/323 (16%)
WD40 repeat 225..268 CDD:293791 10/50 (20%)
WD40 repeat 273..312 CDD:293791 4/38 (11%)
WD40 repeat 319..363 CDD:293791 7/45 (16%)
WD40 repeat 369..409 CDD:293791 7/55 (13%)
WD40 repeat 416..452 CDD:293791 10/58 (17%)
WD40 repeat 459..482 CDD:293791 6/34 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19918
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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