DRSC/TRiP Functional Genomics Resources

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Protein Alignment cort and CDC20B

DIOPT Version :9

Sequence 1:NP_001260144.1 Gene:cort / 33937 FlyBaseID:FBgn0000351 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001163873.1 Gene:CDC20B / 166979 HGNCID:24222 Length:519 Species:Homo sapiens


Alignment Length:507 Identity:102/507 - (20%)
Similarity:193/507 - (38%) Gaps:150/507 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 WKQE--AAYKSDT-SKGQEVSYVGE---RFIPNRFERENIEFNLKYIGKRKERDILET---GVTL 88
            |:|.  .|..||: .:.|..:|:.|   ..:....|:|.:.     :|.|||:  |:|   |::.
Human    77 WQQSQTRALSSDSFGEEQSTTYLPEASGSVLKTPPEKETLT-----LGSRKEQ--LKTPSKGISE 134

  Fly    89 TASY--------------WRQSGFISNINRTFGIGERRLFQ-FSSQ---QGTRSRVVDNDSADSD 135
            |::.              |::|        ....|::.|.| |.:|   |....::...:.::..
Human   135 TSNSALHFCKAPHAMDRDWKES--------VASKGQKCLKQLFVTQNVVQQANGKMQLCEQSECV 191

  Fly   136 WP-CNP--RARPYAIQNATHEMPGICSPV----------DY--NMMDWSSGGMVAMSSGQDVMLW 185
            |. |..  |...:.::::......|..|.          ||  |::|||...:||::.|..|.:|
Human   192 WKGCKDGVRDESFHLKSSGDINDSILQPEVKIHITGLRNDYYLNILDWSFQNLVAIALGSAVYIW 256

  Fly   186 --------RNLDESTMVFSVESPTSLKYSPDGKHLAIGCMDRNYPVLDLWEVRSPTEFLVSYRKL 242
                    .|:|.|.....:.|.:.:|   :|..||:|..:..   :.||:|.:        :|.
Human   257 NGENHNGIENIDLSLTCNYISSVSWIK---EGTCLAVGTSEGE---VQLWDVVT--------KKR 307

  Fly   243 FFKSMGYIS---CIEWSHDGKEVICGTQCGVI----IVLAMPTLNTLMQLREHRHTVKKMKFAPT 300
            ....:|::|   .:.|:|  ..:..|::.|.:    :.:|...:.||    .|:..|..:|::|.
Human   308 LRNMLGHLSVVGALSWNH--FILSSGSRLGRVYHHDVRVAQHHVGTL----RHKQAVCALKWSPD 366

  Fly   301 HKYFASSDTDGKIFIF----DAVLKVRLLKLDGRSI---VFDWHPWTGEDLAVAERSPASIFIFN 358
            .:..:|..:||.:.|:    .|..:.:.||:..:|.   ..||.||....||:..          
Human   367 GRLLSSGCSDGLLTIWPHDPGASAQGQPLKVITQSTAVKAMDWCPWQSGVLAIGG---------- 421

  Fly   359 IPRRQFVASYRRRDDRIVIKTLTYSKITGELLVNVIRRDDADLAVCEILVL-------------- 409
                      ..:|.|:.|..:...|        .|:....:..:|.::.|              
Human   422 ----------GMKDGRLHILDINAGK--------SIQTPSTNSQICSLIWLPKTKEIATGQGTPK 468

  Fly   410 --------ASLNRVVDLMSHQDRGTLFLMWNPDGTKIATGGLDDTFSLWNFF 453
                    .:::|......|:.| .|.|..:||.|::.:...|.|.|:||.:
Human   469 NDVTVWTCPTVSRSGGFFGHRGR-VLHLSLSPDQTRVFSAAADGTASVWNCY 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cortNP_001260144.1 WD40 <166..453 CDD:225201 68/330 (21%)
WD40 166..451 CDD:295369 66/328 (20%)
WD40 repeat 201..244 CDD:293791 9/42 (21%)
WD40 repeat 251..287 CDD:293791 8/42 (19%)
WD40 repeat 292..326 CDD:293791 8/37 (22%)
WD40 repeat 334..369 CDD:293791 6/34 (18%)
WD40 repeat 377..419 CDD:293791 6/63 (10%)
WD40 repeat 427..466 CDD:293791 10/27 (37%)
CDC20BNP_001163873.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..133 16/60 (27%)
WD 1 229..266 11/36 (31%)
WD40 <230..518 CDD:225201 70/336 (21%)
WD40 repeat 235..271 CDD:293791 11/35 (31%)
WD 2 271..310 10/52 (19%)
WD40 276..517 CDD:295369 55/289 (19%)
WD40 repeat 276..313 CDD:293791 10/50 (20%)
WD 3 311..341 6/31 (19%)
WD40 repeat 319..350 CDD:293791 5/32 (16%)
WD 4 353..392 9/38 (24%)
WD40 repeat 358..399 CDD:293791 10/40 (25%)
WD 5 399..441 12/69 (17%)
WD40 repeat 405..443 CDD:293791 11/65 (17%)
WD 6 443..484 3/40 (8%)
WD40 repeat 448..486 CDD:293791 3/37 (8%)
WD 7 487..519 12/32 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0305
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19918
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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