DRSC/TRiP Functional Genomics Resources

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Protein Alignment cup and eif4enif1

DIOPT Version :9

Sequence 1:NP_001285687.1 Gene:cup / 33934 FlyBaseID:FBgn0000392 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_012821794.2 Gene:eif4enif1 / 780398 XenbaseID:XB-GENE-949044 Length:951 Species:Xenopus tropicalis


Alignment Length:853 Identity:166/853 - (19%)
Similarity:272/853 - (31%) Gaps:305/853 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 LNHSK---------------WGYNDEDYHS--YHN-GKSQHMEEVNSKNSKNMTVLQ-------- 486
            |.|||               |  :.|.:||  |.| |:|..:|.:...:....|.|:        
 Frog    39 LPHSKERPSCLLDKYDSDGVW--DPEKWHSSLYPNSGRSSPVEALKKDSDTERTSLKRRIADPRE 101

  Fly   487 --FFDNGEISSQPQRRP---NTPVMGMSINRSENDTLHSNESSEDLSRANENYVKRVMSGFLVVS 546
              ..|:.::...||||.   ...|:..:.:|.....| .|:.:|.:.....   :|:.||.::.:
 Frog   102 RVKEDDLDVVLSPQRRSFGGGCHVIAAASSRRSGSPL-DNKENESMRMLGS---RRIGSGRIMTA 162

  Fly   547 KPKSRDVE-DRHHR------------RYRNQN------------------EEPEWFSCGPTSRLD 580
            :...|||. ||..|            |:|.::                  |||||||.||||:.:
 Frog   163 RGFDRDVRGDREPREGRDREKEYKDKRFRREHGDSKRVFGERRRNDSCTEEEPEWFSGGPTSQSE 227

  Fly   581 TIELCGFDEDEEKMLKEGNKNHGLGETERETSKQKMDHKYKWTHAEPMGRSKYMPKHDTNNNHNV 645
            ||||.|||   :|:|:|.:|  |...|.:.|.|:.::                       .|..|
 Frog   228 TIELTGFD---DKILEEDHK--GRKRTRKRTGKEVIE-----------------------CNGGV 264

  Fly   646 ENMNNVMATEHQQQKE--------EKRPGSGRSFQFDKFNQSQQNYESSSYVNHQQPPQTQPQQM 702
            ......:..||...:|        |..||   .|.|::|    .|.:.|       .|.......
 Frog   265 LEEEVALPPEHAADQEVPEEAVLPEPAPG---EFDFNEF----FNLDKS-------VPGLASMIE 315

  Fly   703 QQQSNTNTNNSKFMSFFANEGNSS--SSSLN-------------EFFKQAINQGHGN-------- 744
            ......:.:.|:|..:|:|...|.  ||||.             |....|:.|..||        
 Frog   316 DVLGEGSVSASRFSRWFSNHSRSGSRSSSLRSTPHEELERLAGLEQVIPALGQNSGNYFAPIQFE 380

  Fly   745 ----------------------------NPEQPKSLGHIGQMPSVDQLEAKWRRNSLNNVGETA- 780
                                        |.|:.:...|.|.:.||:::||.::...:...|:.| 
 Frog   381 ERSDKVDILEILHKAKVDLKPLLSSLTANKEKLRERTHSGVVLSVEEVEAGFKGLKVEQEGKVAT 445

  Fly   781 --------------------NKQTD--NFQKLIGSLSSAKPQSQAVGYDAISNFIMQQQQYQQQQ 823
                                .|..|  .|.||:.|:.:             |..:..|.:..:.|
 Frog   446 PYMAEQLEEALTAMAGPRKIRKDGDMSAFNKLVSSMKA-------------SGTLPSQPKVNRNQ 497

  Fly   824 QKQHLIIQQQQQHTAFLASLQLKAILGR--ADTQLLLLRLTKGEISKHGLLVQLA-NPRL----- 880
              ...::......|..|....|:.:||:  .|:...:|....|.:....||.|.: :|::     
 Frog   498 --DGAVLSSSNVATPPLQRNILQELLGQPIPDSSSHVLSNLMGTLDSASLLQQRSPSPQIPQVFP 560

  Fly   881 --------------------------------TDMDREAITAVLQFTNTQQQQQQHKQQLDMLSS 913
                                            |.:.:|....:.|.:..:.||    ..||....
 Frog   561 TRASSADYLRNRIPSPKGFPSGASQFLGEQFPTGLPKEEGPMMAQVSPLEMQQ----AALDGFIP 621

  Fly   914 TVIASQLQNLHN-------LAIVQQTLAARQQPQHN---------------PQTQAPHQLSQEDL 956
            |.||.|..|.::       :...::...:|.||:.|               |.......||..  
 Frog   622 TDIALQAANYYHPGYGKMQMDKSREHFRSRPQPRVNKSPVANMRGASLSPGPGASVTSMLSPS-- 684

  Fly   957 QAHANVIMRNAVMKRKIEEQTSKLINGGAKHQAQQQYLNRGQQRQA----RPDANSNALLHALIS 1017
            ....:||.:....|.|.:::|....|.|.|.:..:. |..|....:    .|...|..:      
 Frog   685 FTPTSVIRKMYESKEKSKDETVTKQNVGGKEEGHRT-LEDGSMPNSITHDSPQETSPVM------ 742

  Fly  1018 GGGNNHASGYPMNGQPQKHHSNLRFGDNQNFQSFESNQ-------PHFATQYKQQYQQ------- 1068
              ||..::....:..|...|.| |:..:|:::...:.:       |.....:.|...|       
 Frog   743 --GNKVSTSQRSSCTPPLPHQN-RYTKDQDYRPKSTGRRTPTVASPVPGASFLQPLHQLPIVPVV 804

  Fly  1069 --SQQQHP 1074
              |.|.||
 Frog   805 RPSHQLHP 812

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cupNP_001285687.1 DUF2477 227..>305 CDD:287586
eif4enif1XP_012821794.2 EIF4E-T 28..700 CDD:371079 143/729 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006297
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12269
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.100

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