DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF260 and crol

DIOPT Version :10

Sequence 1:NP_001012774.1 Gene:ZNF260 / 339324 HGNCID:13499 Length:412 Species:Homo sapiens
Sequence 2:NP_477243.1 Gene:crol / 34592 FlyBaseID:FBgn0020309 Length:962 Species:Drosophila melanogaster


Alignment Length:403 Identity:165/403 - (40%)
Similarity:233/403 - (57%) Gaps:4/403 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    13 DLLQHDQIHTGEKPYECNECRKTFSLKQNLVEHKKMHTGEKSHECTECGKVCSRVSSLTLHLRSH 77
            ||.:|.:||.|...:.|..|...|:...:|..|.|.|:.:|...||.|.|..:|...|..|.|||
  Fly   263 DLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSH 327

Human    78 TGKKAYKCNKCGKAFSQKENFLSHQKHHTGEKPYECE---KVSIQMPTIIRHQKNHTGTKPYACK 139
            ||:..::|..|.|.|::||:.::|.:.||||.|:.|:   |...:....:.|...|||..|:.|.
  Fly   328 TGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCD 392

Human   140 ECGKAFNGKAYLTEHEKIHTGEKPFECNQCGRAFSQKQYLIKHQNIHTGKKPFKCSECGKAFSQK 204
            .|||.:..|.:|..|.:.||.|.||.|..||::||:|::...|...|||:.|.:|..|.|.|::|
  Fly   393 VCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRK 457

Human   205 ENLIIHQRIHTGEKPYECKGCGKAFIQKSSLIRHQRSHTGEKPYTCKECGKAFSGKSNLTEHEKI 269
            |:|:.|.|.||||.|:.|..|.|.|.:|..|:.|.|.||||.|:.|..|.|||:.|.::..|.:.
  Fly   458 EHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQ 522

Human   270 HIGEKPYKCNECGTIFRQKQYLIKHHNIHTGEKPYECNKCGKAFSRITSLIVHVRIHTGDKPYEC 334
            |.||.|:||..|...|.:|::|..|...|||:.|:.|:.|.|.|:|...|..|||:||||.|::|
  Fly   523 HTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKC 587

Human   335 KVCGKAFCQSSSLTVHMRSHTGEKPYGCNECGKAFSQFSTLALHM-RIHTGEKPYQCSECGKAFS 398
            :.|.|.|.:...|..|||.|:.:.|:.||.|.|.|::...|..|| |.|||::|:.|..|||:|.
  Fly   588 EYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFP 652

Human   399 QKSHHIRHQRIHT 411
            .|.:.:.|||.||
  Fly   653 LKGNLLFHQRSHT 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF260NP_001012774.1 COG5048 25..406 CDD:227381 154/384 (40%)
C2H2 Zn finger 29..49 CDD:275368 6/19 (32%)
C2H2 Zn finger 57..77 CDD:275368 8/19 (42%)
C2H2 Zn finger 85..130 CDD:275368 15/47 (32%)
C2H2 Zn finger 138..158 CDD:275368 7/19 (37%)
C2H2 Zn finger 166..186 CDD:275368 7/19 (37%)
C2H2 Zn finger 194..214 CDD:275368 9/19 (47%)
C2H2 Zn finger 222..242 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 7/19 (37%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
C2H2 Zn finger 306..326 CDD:275368 9/19 (47%)
C2H2 Zn finger 334..354 CDD:275368 8/19 (42%)
C2H2 Zn finger 362..382 CDD:275368 9/20 (45%)
C2H2 Zn finger 390..410 CDD:275368 9/19 (47%)
crolNP_477243.1 C2H2 Zn finger 223..243 CDD:275368
C2H2 Zn finger 251..271 CDD:275368 3/7 (43%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
COG5048 300..723 CDD:227381 152/366 (42%)
C2H2 Zn finger 307..327 CDD:275368 8/19 (42%)
C2H2 Zn finger 335..355 CDD:275368 7/19 (37%)
C2H2 Zn finger 363..383 CDD:275368 3/19 (16%)
C2H2 Zn finger 391..411 CDD:275368 7/19 (37%)
C2H2 Zn finger 419..439 CDD:275368 7/19 (37%)
C2H2 Zn finger 447..467 CDD:275368 9/19 (47%)
C2H2 Zn finger 475..495 CDD:275368 8/19 (42%)
C2H2 Zn finger 503..523 CDD:275368 7/19 (37%)
C2H2 Zn finger 531..551 CDD:275368 6/19 (32%)
C2H2 Zn finger 559..579 CDD:275368 9/19 (47%)
C2H2 Zn finger 587..607 CDD:275368 8/19 (42%)
C2H2 Zn finger 615..636 CDD:275368 9/20 (45%)
C2H2 Zn finger 644..664 CDD:275368 9/19 (47%)
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 704..722 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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