DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tango1 and mia2

DIOPT Version :9

Sequence 1:NP_609058.2 Gene:Tango1 / 33930 FlyBaseID:FBgn0286898 Length:1430 Species:Drosophila melanogaster
Sequence 2:XP_012824053.2 Gene:mia2 / 779734 XenbaseID:XB-GENE-993630 Length:1562 Species:Xenopus tropicalis


Alignment Length:1624 Identity:355/1624 - (21%)
Similarity:595/1624 - (36%) Gaps:397/1624 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 MQPQLSDLALVLGLLICCLPTLTWAATLSDKRLCADPKCEQIISMGIAKITYAIGGEGLISFKIN 74
            |..|.....:|||||: .:| |.....||||:.||||.||.::....|...|.......:|||:.
 Frog     1 MVEQWGHRIVVLGLLL-SVP-LQSQKILSDKKKCADPHCESLMFRAQAIQDYNGPDCRYLSFKVG 63

  Fly    75 SPIRVLSKSAGSNMQLWGVDINGRRGY---------------------ANKDFIM---------- 108
            :.|.|..|.:|....||........|:                     ...||:.          
 Frog    64 AEIIVYYKLSGKREDLWQGSTGKEYGFFPMHTVTIEEIYVTEEVEVDAQEIDFVCLNGGEYVFEN 128

  Fly   109 EKKILVRDKDLLY----EVPVVGPGSPVQSVETPVQSVETTVQPVLNASESTDDLATTTTSPLEI 169
            |..:|::.::..|    |..|:.....|.:.||   :.||.:|    .||:.:::..:..|...|
 Frog   129 EDSVLLKPEESEYARDLESKVIKDNKFVGNTET---NTETNIQ----TSENLEEIDKSKWSTSSI 186

  Fly   170 A-----VDSIVVEHDKLQDQQVPDPTAASK----AQVQVIEGT---ELPLEAIAATTEGSIVP-- 220
            |     .:|...:..::..:.|.:.|..|:    ::...|:||   ||......::...:.:|  
 Frog   187 AGWFGIGESEDKQSTEINTEPVKEDTFHSRKIAISEEMEIKGTDEVELKKSGWLSSQFTNFLPFG 251

  Fly   221 --ETAADPQEATNLDSTVVDTKEPQALNSEAIKLQEEPKAQQPATEAEKPPPLPQAINAELEDA- 282
              |..|..|:....|.....|.:...:.   :.::|.|.....:||     |..:..|..::|. 
 Frog   252 KREVDAPVQKEKTDDVVSAHTSQSDEMK---MNVKEIPTEASTSTE-----PQSKWFNFAIKDVF 308

  Fly   283 -----------DDFDYGD-----------------------------DETDDDSQQGSQD----- 302
                       |..::||                             |||....:.||.|     
 Frog   309 GVGSKDEVKIKDVHEHGDIILENEPSEISSDGEELTATNSEDREETFDETKSQEKGGSCDSQLLD 373

  Fly   303 -----------NESIVEIANDNKSINESI-ELKPLSVAQLKKTDK------VEDSKDETKEKHAE 349
                       ::||..:.::|::..:|. ||....:::...|..      |.:.:|.|.|.|.|
 Frog   374 DFSCVMSGGKGSQSIESVISENQNTLQSYKELHNEDISENSYTQSYAMPNWVNNKEDRTVEIHIE 438

  Fly   350 MEVSKQEDSSLPTETLNVTALEEQIDQKEFPKQVLDAAVELKSSDPLPVEEVTETVAEPPRTIVE 414
            ...:..|..|     .|....:|.:.......:..|.|...|:|..|.:        ||...|:.
 Frog   439 ARETIYEGQS-----YNSKENKEMVQADSGKTENHDMANGQKNSSKLSL--------EPSLNILP 490

  Fly   415 DKINEEIVPVSAKIQAKPATV--NPTEPIVAQSDAEIKAPSESVISSTTPAPVVEEAPQKA--DP 475
               |.:...::..:|....|.  :..||....:| ||:....:.|:||..........||:  ..
 Frog   491 ---NTDTNGINTLVQTTTGTTSGDRDEPKKTYTD-EIENQFTAEINSTVSPKEENNKSQKSFIPQ 551

  Fly   476 VGLPPLFEKKNFEN-PNNYY--KQLQEEQEKQRLVAEAEEQKRLQEEADQQKRLQEEAALNKRLL 537
            |.|....:||:.:. .||.|  ..:.|...|:..|.:..                         |
 Frog   552 VDLLESQDKKDLDTLKNNIYSSNHIDEASPKENTVVDLP-------------------------L 591

  Fly   538 EEAEQQKRLQEEAEQQKRLQEEAELNKRLLE-EAEKQKRLHEESEQLQRSSEEAEPQLSVQEANM 601
            ::..:|...:......|..:|..::|:...: ..||.|.|..::..:   ||....:||....|.
 Frog   592 DDKIEQMYAENTVNSTKTQEENIKINEFSADGTKEKHKILSTDNPIV---SETFRTELSSDIGNP 653

  Fly   602 QQLNDSVDSQSNEIVDNNNRQ---QPEQYQQHHHHTESAFNHPST--ASHTTPTPDAESPYAAVQ 661
               |...|..||..:.....|   ...:..:|....|:|.....|  ..:.|...:.:.|    |
 Frog   654 ---NTDCDISSNTKIHKTVAQDFLSKNELSEHSQELETAAERIPTFQPGYDTLKEELDLP----Q 711

  Fly   662 EETTEASQTDNHREGVGYVEPVALPATAS-PVSEVPIK-EDAAGFGLFAT--IVDTVNNFIGKDP 722
            |.|....|..|.|     :|..:...|.| .|:....| .:...||..|.  |::...|:|    
 Frog   712 ENTFHQGQKLNAR-----MEKASESTTLSFKVNGFVFKITELTAFGEMAASEILEIYTNWI---- 767

  Fly   723 QSDPADSSDELHRILYPGRPEVPPSQRKAEDFAPADVDGYCARFQAKDEHCHRSISLDNFVEVMA 787
              .||.||  :.||       .........|..| |.|.|...:                 ||:|
 Frog   768 --CPAVSS--IVRI-------TKQVMSTLSDLLP-DSDFYGCSW-----------------EVVA 803

  Fly   788 -DKLVDHSQLLL--CVVIAAISSLFFMFAYYCFCNSSQEGALLSKLNHLERSLLASHKENLIIKH 849
             ..|...|.:||  |..:.:|.|.         |.:.:|..|.:|.     |...:.|..::.|.
 Frog   804 FTALFGFSTVLLFTCRTVRSIKSR---------CYAGREKKLSAKF-----SEAVNGKSEVLQKL 854

  Fly   850 DLMTTRTK--LASIEDNSFGSNDMVADL--KKQLESELYE-KAKLQEQVGSLERDLDNAAEAGLE 909
            .::..:.:  ..|:||:|  ...::|::  :|.|:..|.: ...|:|::..||::|:.....|||
 Frog   855 SIIQKQYEEVQQSLEDSS--HQRLLAEITEQKTLQETLQKSNCDLEEKILKLEQELEEEKALGLE 917

  Fly   910 LNKMLSEVLNGQNGDEAFMSTVDELQRQLNDQEKI-----IIEINNSLAEKSRENSELQYTFTEA 969
            |...:|.|      :|...:..|:|::..:.:|:|     :.|||....|.|.:::         
 Frog   918 LETKISNV------NEKIKTLEDDLKKGKSQKEEIHTTMKVFEINQGRLETSSQDA--------- 967

  Fly   970 TTRLNSELKTLQEDNYELEMEKSKLQTRLQEIQAETESELAKALEARNYEMQKLQNQIVEL---- 1030
                ..|...|||...:|..|....:.|..|: ||....|:.:::|.:.:|...|.||..|    
 Frog   968 ----IEERSHLQESIKQLSKEAEGWEERFSEL-AENSKMLSSSVDAMHEDMNNKQIQIKSLIDNL 1027

  Fly  1031 ----------------------TVKWEREHGDLQTSLAKIEALEDCLKAVGKDAIHNVQELITSA 1073
                                  .:.|:.|:|         |:|.|..|       ..:::||.:|
 Frog  1028 LKMKDWGPEMDEVEEGEDLSIPNLTWDFENG---------ESLADPQK-------RTIKKLIYAA 1076

  Fly  1074 KTRGELNAVHKKLVELQSKVEQEEAHKQRLESQLQQSSQDVEQLKQDFNQSERDKLEAQT----- 1133
            .....|.:...:..:|...:..|    .:::.||.:...:::..||.. .||:::||...     
 Frog  1077 MLNASLRSTESEKKQLYDNLSDE----MKVKEQLLECINNLQNTKQSL-ISEKEQLEGDVENMKH 1136

  Fly  1134 RLEVLSGYFREKENDLKKELSLQETKWLQHQGENASTVETQTLMKNEIQTLKSQNDELRAEIEAQ 1198
            ::.|:|..::|.|..|.::|::||.:.:|.:.:.:...|...|...|:.|:|::..||..|||..
 Frog  1137 KMSVMSEMYQENEKKLHRKLTVQEKERIQKEEKLSKVDEKIHLATGELLTVKTRVKELEDEIEKT 1201

  Fly  1199 IASHKAQMGTLENRAHESWLAARQSERRCEEALAEAASLRRKLTTMASGGGGVGGDPGVMEAIAA 1263
            :.|:::|:.:.|.::|::||.||.:||...|...|.|..|:||.........:..||..::.|.|
 Frog  1202 VYSYQSQVTSYEKKSHDNWLTARAAERHLSEIKKETAHFRQKLIEAEYKVELLEKDPFALDVIHA 1266

  Fly  1264 NGTSVLGAELKTAPSPLPLPGSPLLNMPNPLPFLAAP--------FSPFMGLPPPFLPPTGAGGA 1320
            .|.:.....:....|. |...||:..:|:...||:.|        .||.:        |....|.
 Frog  1267 IGRAYADVFINHQDSS-PYGISPISRLPDSRAFLSPPTLLEGPLRLSPML--------PGVDRGV 1322

  Fly  1321 RPPPLGRMRSPPPSSRGDRDRERYSDYSDYDDYDDDEEDDRGMDRRRRHS--GS----WGRRHRG 1379
            |||      ...|:..|.::|             .|...||..|::|.||  ||    |.|.|:.
 Frog  1323 RPP------GYYPAHGGVKER-------------GDINADRKADQQRTHSDAGSLSPPWERDHKA 1368

  Fly  1380 SYSHSPRTYRSLSPSDSR-----YNYNDTETDFSPPP--------SPPPVPSGRSA-TSRPYSE 1429
            |.......|..| |..||     |.|..:...||.|.        |...:|.|:|| |.|..||
 Frog  1369 SMPPPGLPYPEL-PFPSRRPERFYQYPVSSGRFSGPAELTRNQGISFTDLPDGQSANTIRNGSE 1431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango1NP_609058.2 SH3 42..113 CDD:302595 21/101 (21%)
GBP_C <495..585 CDD:303769 12/90 (13%)
PKK 496..606 CDD:289257 17/110 (15%)
coiled coil 560..571 CDD:293879 1/11 (9%)
Drf_FH1 <1291..1337 CDD:283903 12/53 (23%)
mia2XP_012824053.2 SH3_MIA2 31..103 CDD:212825 18/71 (25%)
Smc <832..1236 CDD:224117 103/451 (23%)
PHA03247 <1288..1562 CDD:223021 47/172 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I4131
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002364
OrthoInspector 1 1.000 - - oto105259
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

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