DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tango1 and mia3

DIOPT Version :10

Sequence 1:NP_609058.2 Gene:Tango1 / 33930 FlyBaseID:FBgn0286898 Length:1430 Species:Drosophila melanogaster
Sequence 2:XP_004914852.2 Gene:mia3 / 100379945 XenbaseID:XB-GENE-5897283 Length:2853 Species:Xenopus tropicalis


Alignment Length:1706 Identity:350/1706 - (20%)
Similarity:602/1706 - (35%) Gaps:555/1706 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 NSPIRVLSKSAGSNMQLWGVDINGRRGYANKDFIMEK--------------KILVRDKDLLYEVP 124
            |:...|||:   .||        |:.....||.|.||              .:|..||..|    
 Frog  1190 NAASAVLSQ---QNM--------GKNNEETKDPINEKVEESSGSPNNLQNSDMLNSDKASL---- 1239

  Fly   125 VVGPGSPVQSVET---------------PVQ-SVETTVQPV-----LNASESTDDLATTTT---- 164
                 :|:|..||               |.| |.:.|||..     |..|..|:|.:..::    
 Frog  1240 -----NPIQDTETKEGKETELNMQMPSVPTQESEDGTVQAANQMDPLQESNKTEDSSLPSSDEDV 1299

  Fly   165 -----SPLEIA-----VDSIVVEHDKLQDQQV--------PDPTA---------------ASKAQ 196
                 :..||.     :.::|:....|.|:|:        |:...               |.|.|
 Frog  1300 KEEDETDNEITSYADDIRNLVIIKSYLDDEQINECIKYLGPENIVRVEAMFHDMESELKLARKGQ 1364

  Fly   197 VQVIEGTELPLEAIAATTEGSIVP--ETAADPQEATNLDSTVVDTKEPQALNSE----------A 249
            |:. :..:..|:.|..::|.||:.  |...|.:||:|.:   :|..|....:.|          |
 Frog  1365 VRQ-DYIDKALDEILESSETSILDFVEAVLDEREASNEE---IDASENNMFDGETYLLENIQEIA 1425

  Fly   250 IKLQEEPKAQQPATE-------AEKPPPL-----PQAINAELEDADDFDY-----GDDETDDDSQ 297
            .||:::..|...:|.       .|:..||     |...|.|.|...||..     .::|..|||.
 Frog  1426 YKLRQKHSAYSDSTHLAPGVQAEEQDSPLEEKEPPNERNQEEEKLADFGQPNEKNQEEEKLDDSG 1490

  Fly   298 QGSQDNESIVEIANDNKSINESIELKPLSVAQLKKTDKVEDS-----KDETKEK--------HAE 349
            |.::.|:. .|..:|:...||          :.::.:|::||     |::.:||        ...
 Frog  1491 QPNEKNQE-EEKLDDSGRPNE----------RNQEEEKLDDSGRPNEKNQEEEKLDDSGRPNERN 1544

  Fly   350 MEVSKQEDSSLPTETLNVTALEEQIDQKEFPKQVLDAAVELKSSD-PLPVEEVTETVAEPPRTIV 413
            .|..|.:||..|.|.   ...||::|....|.:......:|..|. |....:..|.:.:..|...
 Frog  1545 QEEEKLDDSGRPNEK---NQEEEKLDDSGRPNEKNQEEEKLDDSGRPNERNQEEEKLDDSGRPKE 1606

  Fly   414 EDKIN-----------EEIVPVSAKIQAKPATVNPTEPIVAQSDAEIKAPSESVISSTTPAPVVE 467
            |:|:|           ||.:..|.:.:.:....:..:|.....|      .|.:..|..|....:
 Frog  1607 EEKLNDSGQQNEKNQKEEKLYDSGQPREEEKLDDSGQPNEKNQD------EEKLDDSGRPTERNQ 1665

  Fly   468 EAPQKADPVGLPPLFEKKNFENPNNYYKQLQEE-------QEKQRL------VAEAEEQKRLQEE 519
            | .:|.|..|.|...||.:.....|...|.:|:       :|:::|      ..:.:|:::|.:.
 Frog  1666 E-EEKLDDSGRPKEEEKLDDSGQPNEKNQEEEKLDDSGQPREEEKLDDSGQPNEKNQEEEKLDDS 1729

  Fly   520 ADQQKRLQEEAALNK--RLLEEAEQQKRLQEEAEQQKRLQEEAELN-------KRLLEEAEKQKR 575
            ....:|.|||..|:.  |..|..:::::|.:..:..:|.|||.:|:       :..|:::.:...
 Frog  1730 GRPTERNQEEEKLDDSGRPTERNQEEEKLDDSGQPTERNQEEEKLDDSGQPREEEKLDDSGRPTE 1794

  Fly   576 LHEESEQL-------QRSSEEAEPQLSVQ--EANMQQLNDSVDSQSNEIVDNNNRQQPEQYQQHH 631
            .::|.|:|       :::.||.:...|.|  |.|.::.|.. ||...|:|...:.:..|:..:..
 Frog  1795 RNQEDEKLDDSGRPNEKNQEEEKLDDSGQPNERNQEEGNLD-DSGRQEVVSEQHIENKEEVLEME 1858

  Fly   632 HHTESAFNHPSTASHTTPTPDAESPYA----AVQEETTEASQTDNHREGVGYVEPVALPATASPV 692
            .||:.....|..:.|...|.:...|.|    :..|||                    :|....|.
 Frog  1859 SHTDKNLEPPFLSDHNVETSETSPPLAHPTDSAPEET--------------------IPNEKEPE 1903

  Fly   693 SEVPIKEDAAGFGLFATIVDTVNNFIGKDPQSDPADSSDELHRILYPGRPEVPPSQRKAEDFAPA 757
            .||..:            |:..:.:...:..:.| ::...|..:|...:..:.|.........|.
 Frog  1904 QEVTAE------------VEVESTYFITEKVTVP-EAIQMLTSLLNATKESLAPLTESLISALPE 1955

  Fly   758 DV----DGYCARFQAKDEHCHRSISLDNFVEVMADKLVDHSQLLLCVVIAAISSLFFMFAYYCFC 818
            |:    |.:..:::|                              .:|.|.:..:..:..::..|
 Frog  1956 DIRPGPDFHGVQWEA------------------------------VIVTAVVGLITILILFWRTC 1990

  Fly   819 NSSQEGALLSKLNHLERSLLASHKENLIIKHDLMTTRTKLASIEDNSFGSNDMVADLKKQLESEL 883
            .|     :.|::..:....||....||:        :.|..::|        .:::.:|::    
 Frog  1991 LS-----VKSRVYQVNEKQLAEKIANLV--------KEKSEALE--------KISECEKKI---- 2030

  Fly   884 YEKAKLQEQVGSLERDLDNAAEAGL---------ELNKML-SEVLNGQNGDEAFMSTVDELQRQL 938
             ::||..|.. :|::..|..|||..         :.||.| |::.|..|...:......:.|..:
 Frog  2031 -KEAKESEST-TLKKSTDLLAEAAALKATIKELKDSNKALDSKMRNIMNDLVSQKEQSKKKQEMI 2093

  Fly   939 NDQEKIIIEINNSLAEKSRENSELQYTFTEA---TTRLNSELKTLQEDNYELEMEKSKLQTRLQE 1000
            |:.:|.|.::.:...|.:.|.||||....|.   ..::.:||:.::::|..|:            
 Frog  2094 NEGQKSIEKLQDKFLEHTVELSELQAALNEVKLKEAKVRNELRGVKDENSRLK------------ 2146

  Fly  1001 IQAETESELAKALEARNYEMQKLQNQIVELTVKWEREHGDLQTSLA----KIEALEDC---LKAV 1058
               ||:.:|.|..|..:...::|..|| :|.   ::.|.||:.:||    :||.|.:|   ||.:
 Frog  2147 ---ETKEQLLKEAEGWSERQRELDEQI-QLQ---QKSHKDLEETLAYKENEIEVLTNCIMQLKQL 2204

  Fly  1059 GKDAI----HNVQELITSAKTRGELNAVHKKLVELQSK--------------VEQEEAHKQR--- 1102
            ..|:.    .|.|:........||:....|:.:::|.|              :|:|:...||   
 Frog  2205 EADSTLVEDGNWQQAGDGELANGEVPEKQKEKMKVQIKQMMDVSRVKTTLSIIEEEKDLYQRKLA 2269

  Fly  1103 --------LESQLQQSSQDVEQLKQDFNQSERDKLEAQTRLEVLSGYFREKENDLKKELSLQETK 1159
                    ||.|:||...|...|:.|..:.:.:....:.::|:|:..:::||..|:|:|:.:|.:
 Frog  2270 DEVSARHDLEEQIQQLQHDGSSLQSDKTRLDNECKTLRQKVEILTELYQQKEMALQKKLTQEEFE 2334

  Fly  1160 WLQHQGENASTVETQTLMKNEIQTLKSQNDELRAEIEAQIASHKAQMGTLENRAHESWLAARQSE 1224
            ....:.:.....|.......|::..|.:..|:..|::....|.|.|:.:.|.:|||:||:||.:|
 Frog  2335 RQDKEQKLTMADEKAVSAVAEVKIYKQRIQEMEEELQKTERSFKNQIASHEKKAHENWLSARSAE 2399

  Fly  1225 RRCEEALAEAASLRRKLTTM-----------------------------------------ASGG 1248
            |...|...|.|:||:||..:                                         .|||
 Frog  2400 RTLAEEKRECANLRQKLIEVNQRVAELQRPAIVKPTPGRPEHQQSLKRGNLSRDGSFGPSPVSGG 2464

  Fly  1249 G----------------------GVGGDPGVMEA-----------------------IAANG--T 1266
            .                      |..||.|.|:.                       :|:.|  |
 Frog  2465 NPSPPLMMDVSGRSSSANLNRSEGPKGDFGAMDIPPGPRCSQADMSGRISAPVELGHLASMGPRT 2529

  Fly  1267 SVLGAELKTAPSP----------------------LP-------LPGSPLLNMPNPLPFLAAPFS 1302
            |.....:...|:|                      ||       .||:|::|.|.....::.|..
 Frog  2530 SSPSMTVDGMPNPPHEPEAPSVAPSFPPPDEAEAVLPGAKGPPSFPGTPVMNSPASAALMSQPPV 2594

  Fly  1303 PFMGLPPPFLPPTGAGGARPPPLGRMRSPPPSSR-----GDRDRERYSDYSDYDDYDDDEEDDRG 1362
            |.|..|   |||.|..|.||   .::..|||..|     |..                 ..|.||
 Frog  2595 PRMIGP---LPPRGPLGPRP---SQLHGPPPGMRPLLPPGPM-----------------PSDPRG 2636

  Fly  1363 MDRRRRHSGSWGRRHRGSY------SHSPRTYRSLSPSDSRYNYNDTETDFSP----------PP 1411
            ..|     |..|.|   .|      ...||.|..|.|.         ..||.|          ||
 Frog  2637 FIR-----GPLGPR---DYPPGPVPPPGPRDYAMLPPG---------VRDFPPGAPIPGPRDFPP 2684

  Fly  1412 SPP--------PVPSG 1419
            .||        |.|.|
 Frog  2685 GPPLARDFPPGPPPPG 2700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tango1NP_609058.2 SH3 42..113 CDD:473055 12/52 (23%)
PTZ00121 <191..672 CDD:173412 126/584 (22%)
Smc <495..>623 CDD:440809 34/158 (22%)
SMC_prok_B 854..>1197 CDD:274008 85/391 (22%)
CwlO1 1078..>1335 CDD:443091 84/398 (21%)
mia3XP_004914852.2 SH3 33..105 CDD:473055
PTZ00121 <517..1238 CDD:173412 15/58 (26%)
SMC_N 1459..2387 CDD:481474 212/1058 (20%)
PHA03247 <2428..2853 CDD:223021 60/313 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.