DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oatp26F and Slco6d1

DIOPT Version :10

Sequence 1:NP_609055.2 Gene:Oatp26F / 33927 FlyBaseID:FBgn0051634 Length:692 Species:Drosophila melanogaster
Sequence 2:XP_017452073.1 Gene:Slco6d1 / 367321 RGDID:1359388 Length:723 Species:Rattus norvegicus


Alignment Length:609 Identity:169/609 - (27%)
Similarity:273/609 - (44%) Gaps:65/609 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LQRFCTAKWALFWLCWGGALQGLIVNGLINVSISTIERRFGLRSRQMGLVASGYDLASFACLVPV 122
            ||||......|.....|....|:|. ||::.|:............:...:.||.|||:|...:..
  Rat    78 LQRFNNINCFLTAYFLGTMAHGMIF-GLVDQSLKVYVSELSPSKLETLTMGSGDDLAAFLVSLVG 141

  Fly   123 TYYGGRRGASKPRFIAIGLIVMGMGSLVFLLPNFLVGNYR----ATIAE---------ANVCETT 174
            .::|||  .::.|::.....|.|:.|:||.:|.|   ||.    .|:.:         ..|||.|
  Rat   142 AHFGGR--GNRVRWMVAACFVTGLASMVFAIPFF---NYEIIKLGTVTDELCIEGKKTTKVCERT 201

  Fly   175 GLPFNSNSSQSMTACELNAMGEGQSENLTWTVWLFLAAQLLHGAGASPLFTLGVTYIDENVSKKM 239
            .:|..|       .|                :..|...|.|||....|.:.|..::|.::|....
  Rat   202 VIPHKS-------TC----------------IAFFNFGQFLHGIAGMPFYLLAFSFIFDHVPTCS 243

  Fly   240 SSVYLGIYYTMATVGPAIGYVFG--GQLLLIYTDWMTVDPVQLSLTSDSKVWIGAWWLGFIFAAA 302
            |.:||.|..|..:||..:||:.|  .::..:..|...|..||     ..::....||..:...|.
  Rat   244 SGLYLAIADTALSVGYVLGYLVGIRNRMFPVKEDMKAVGHVQ-----QFRILQRNWWRSYFAVAV 303

  Fly   303 MCLLIALPIFGYPKLLPGAEKLQLERVSEAHATISEADDSSNV---VRGLPRAVLSLLANPTFFF 364
            ......||:..:|..|.||::::||: |:...||........:   ::|:..|:..||.||....
  Rat   304 FAFCTTLPLSCFPSRLRGAQQIRLEK-SKEPPTIDRRLKDKEIQPGLKGVLHAIWCLLRNPLVLT 367

  Fly   365 LNLAGATEGLVIAGFAAFLPKQIENQFSISPMYSALVMGLITVPAGGGGTFLGGYLVKKWNLACR 429
            ......|:.|.:.....||||.:::.|.|.|..::::.|:..:|....|.|||||:|.:..::.:
  Rat   368 QTFCQVTKSLTLKSSGYFLPKFLQSHFLIVPTNASILTGMFVLPGALIGRFLGGYIVDRLQMSTK 432

  Fly   430 GIIKMCLLATTVA-ALFTICFLVSCPNPKFAGVTTGYKMQPSSDSPALVASCNSNCGCSRTNYDP 493
            .::|..::::.:: .||.:.|..||....|||:...|.......:  ..|.||..|||:.|:|..
  Rat   433 VVLKFMMVSSFISVVLFLLTFFWSCETAGFAGINDDYDGLGKLGN--FTAPCNEYCGCTMTDYST 495

  Fly   494 ICGVDGVMYYSPCYAGCVQEEHANSLKRYHNCSCIEQVGFVDDGNPSSEAPHFRPDATNRKCDST 558
            |||.|...|:|.|:|||...:.....|.|:|||||:: |..   .|..:...|  ||.:..|::.
  Rat   496 ICGRDEKQYFSACFAGCRASKPLRKEKAYYNCSCIKE-GLT---APDDDGQFF--DAVSGTCNTK 554

  Fly   559 CQTLPLFVALCFILMVFTFLATMPALSATLRCVQDDQRSFALGLQWIKVRLLGTIPAPLIFGALI 623
            |.||||..|..|...||:...::|:....|:.|.....|.:||:.:...|.||::|..|:|.:..
  Rat   555 CLTLPLLFAFYFAATVFSNFCSVPSFMIVLKSVPASWNSMSLGVTYTIWRFLGSVPDHLLFESTS 619

  Fly   624 DESCILWQ-ESCDKDAGGACLVYD 646
            |.:|..|. .||.:.  |.|.:|:
  Rat   620 DYTCNFWDINSCGEK--GRCWIYN 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Oatp26FNP_609055.2 MFS_SLCO4_OATP4 64..589 CDD:340961 146/543 (27%)
Slco6d1XP_017452073.1 MFS 84..585 CDD:475125 146/543 (27%)

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