DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-iota and kirrel3b

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_021323594.1 Gene:kirrel3b / 572369 ZFINID:ZDB-GENE-100713-3 Length:795 Species:Danio rerio


Alignment Length:321 Identity:81/321 - (25%)
Similarity:131/321 - (40%) Gaps:61/321 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NNSTVPVGRDALLTCVVHDLVSFKVAWLRVDTQTILS---IQNHVITK-NHRISISHTEHRIWQ- 97
            :|..||.|::   |.|..|:....:..|.|:.|.:|.   ::.|...| |..:    |::: |. 
Zfish   211 SNKAVPNGKE---TSVTIDIQHLPLVNLSVEPQPVLEGNLVKFHCSAKANPPV----TQYK-WAK 267

  Fly    98 --LKIRDVQES------DRGWY----MCQINTDPMKSQ--MGYLDVVVPPDIVDYQTSQDVVRST 148
              ..|::|...      |..::    .|:: |:|:.|.  ...:||...|.:.....|..|  ..
Zfish   268 GGSVIKEVSGDTYEVIVDHSFFTEPVSCEV-TNPLGSTNISRNVDVYFGPRMAAEPQSLQV--DL 329

  Fly   149 GQNVTLTCSATGVPMPTITWRREEATPILISDDGDREVFSVEGQNLTLWQVQRSHMGAYLCIASN 213
            |.:....|:.||.|..||.|.:..:..:|.:::           .|||..|::...|.|:|.|  
Zfish   330 GSDAVFNCAWTGNPSLTIVWMKRGSGVVLSNEN-----------ILTLKSVRQEDAGKYVCRA-- 381

  Fly   214 GVPPTV---SKRVMLVVNFAPTIWTRYDTIYVGLGQKLTLECITESQPASVNF-WLRDSQLLQGG 274
             |.|.|   .|.|.|.||..||| :...|.....|:|..::|...|.|..... |.....:|:.|
Zfish   382 -VVPRVGAAEKEVSLTVNGPPTI-SSTQTHQAPHGEKGQIKCFIRSTPPPDRIAWSWKETVLESG 444

  Fly   275 -----SYESVSVDHVFRIVMRITLRPITKRDFGE-YICRAKNAMGQTDRIITVHHKAKKHG 329
                 :.|:||.:.  .::..:|:..|...||.. |.|.|.|:.|....||    :.|:.|
Zfish   445 TSGRYTVETVSTED--GVLSTLTMSNIVPADFQTIYNCTAWNSFGSDTEII----RLKEQG 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 23/104 (22%)
Ig 39..122 CDD:299845 22/99 (22%)
Ig 132..213 CDD:299845 20/80 (25%)
IG_like 141..227 CDD:214653 25/88 (28%)
IG_like 239..322 CDD:214653 23/89 (26%)
IGc2 245..313 CDD:197706 19/74 (26%)
kirrel3bXP_021323594.1 IG_like 35..124 CDD:214653
Ig2_KIRREL3-like 146..227 CDD:143236 6/18 (33%)
Ig_2 235..312 CDD:316418 16/82 (20%)
I-set 316..397 CDD:333254 26/96 (27%)
Ig5_KIRREL3 399..496 CDD:143306 26/103 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.