DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and lrit1a

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001018174.2 Gene:lrit1a / 553943 ZFINID:ZDB-GENE-040924-5 Length:643 Species:Danio rerio


Alignment Length:196 Identity:49/196 - (25%)
Similarity:77/196 - (39%) Gaps:63/196 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LLTCVVHDLVSFKVAWLRVDTQTILSIQNHVITKNHRISISHTEHRIWQLKIRDVQE------SD 107
            |..|.::|||.|:                    |:..:|::..:.|   |:..|.:.      ||
Zfish   202 LCDCRLYDLVQFQ--------------------KSPSLSVAFIDTR---LRCADPESLSGVLFSD 243

  Fly   108 RGWYMCQINTDPMKSQMGYLDVVVPPDIVDYQTSQDVVRS-TGQNVTLTCSATGVPMPTITWRRE 171
            .....||                 .|.:   .|:...||| .|.||.|.|...|||:|.:.|||.
Zfish   244 AELRRCQ-----------------GPRV---HTAVARVRSAVGNNVLLRCGTVGVPIPELAWRRA 288

  Fly   172 EATP----ILISDDGDREVFSVEGQNLTLWQVQRSHMGAYLCIASN--GVPPTVSKRVMLVVNFA 230
            :..|    :|:.:..:..|:|:    |::..|.....|.|:|.|:|  |....|   :.|::|.|
Zfish   289 DGKPLNGTVLLENSKEGIVWSI----LSVPAVSYRDTGKYICKATNYAGSAEAV---ISLIINDA 346

  Fly   231 P 231
            |
Zfish   347 P 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 15/81 (19%)
Ig 39..122 CDD:299845 15/78 (19%)
Ig 132..213 CDD:299845 27/85 (32%)
IG_like 141..227 CDD:214653 29/92 (32%)
IG_like 239..322 CDD:214653
IGc2 245..313 CDD:197706
lrit1aNP_001018174.2 leucine-rich repeat 61..84 CDD:275378
LRR_8 63..119 CDD:290566
LRR_RI <77..175 CDD:238064
leucine-rich repeat 85..108 CDD:275378
LRR_8 108..167 CDD:290566
leucine-rich repeat 109..132 CDD:275378
leucine-rich repeat 133..156 CDD:275378
leucine-rich repeat 157..170 CDD:275378
LRRCT 199..243 CDD:214507 11/63 (17%)
I-set 252..343 CDD:254352 31/100 (31%)
Ig 259..333 CDD:299845 26/77 (34%)
fn3 448..515 CDD:278470
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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