DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and opcml

DIOPT Version :10

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001005580.1 Gene:opcml / 449538 ZFINID:ZDB-GENE-040927-3 Length:342 Species:Danio rerio


Alignment Length:293 Identity:89/293 - (30%)
Similarity:146/293 - (49%) Gaps:20/293 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NNSTVPVGRDALLTCVVHDLVSFKVAWLRVDTQTILSIQNHVITKNHRISISHTEHRIWQLKIRD 102
            :|.||..|..|:|.|.:.:.|| :||||  :..|||...|...:.:.|:.:.:|....:.:||.:
Zfish    40 DNITVRQGDSAVLKCSMDNKVS-RVAWL--NRTTILFTGNEKWSLDPRVVLLNTAVNEYSIKILN 101

  Fly   103 VQESDRGWYMCQI--NTDPMKSQMGYLDVVVPPDIVDYQTSQDVVRSTGQNVTLTCSATGVPMPT 165
            |...|.|.|:|.|  |..|..::: :|.|.||..||:..|  ||..:.|.||:|.|.|.|.|.|:
Zfish   102 VNLYDEGPYVCSILTNKKPESTKV-HLIVQVPARIVNVST--DVSVNEGSNVSLMCLAIGRPEPS 163

  Fly   166 ITWRREEATPILISDDGDREVFSVEGQNLTLWQVQRSHMGAYLCIASNGVPPTVSKRVMLVVNFA 230
            |.|:       ..|..|:|.|  .||:.:.:..:.:...|:|.||.||.:.|...:.|.:.||:.
Zfish   164 ILWK-------FRSSKGNRIV--TEGEYVEMTGITKDMSGSYDCITSNDISPPDVRTVQVTVNYP 219

  Fly   231 PTIWTRYDTIYVGLGQKLTLECITESQPASVNFWLRDSQLLQGGSYESVSVDHVFRIVMRITLRP 295
            |.| :|..:....:|||..|.|...:.|.:...|.:..:.:..| :..|.:::..:..| :|...
Zfish   220 PVI-SRARSTGTAVGQKGVLWCEASAVPLADFQWFKGERRILNG-FNGVKIENKGKQSM-LTFFN 281

  Fly   296 ITKRDFGEYICRAKNAMGQTDRIITVHHKAKKH 328
            :::.|:|.|.|.|.|.:|.|:..|.::.....|
Zfish   282 VSEEDYGNYTCVAINTLGITNASIILYGPGAIH 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 29/87 (33%)
Ig strand B 48..52 CDD:143290 2/3 (67%)
Ig strand C 61..65 CDD:143290 2/3 (67%)
Ig strand E 96..100 CDD:143290 0/3 (0%)
Ig strand F 110..115 CDD:143290 2/4 (50%)
Ig 133..227 CDD:472250 30/93 (32%)
Ig strand B 152..156 CDD:409562 2/3 (67%)
Ig strand C 165..169 CDD:409562 1/3 (33%)
Ig strand E 192..196 CDD:409562 0/3 (0%)
Ig strand F 206..211 CDD:409562 2/4 (50%)
Ig strand G 220..223 CDD:409562 0/2 (0%)
Ig_3 231..310 CDD:464046 19/78 (24%)
opcmlNP_001005580.1 Ig 41..129 CDD:472250 30/91 (33%)
Ig strand B 50..54 CDD:409353 2/3 (67%)
Ig strand C 62..66 CDD:409353 2/3 (67%)
Ig strand E 95..99 CDD:409353 0/3 (0%)
Ig strand F 109..114 CDD:409353 2/4 (50%)
Ig strand G 122..125 CDD:409353 0/2 (0%)
Ig 128..214 CDD:472250 33/96 (34%)
Ig strand B 150..154 CDD:409353 2/3 (67%)
Ig strand C 163..167 CDD:409353 1/3 (33%)
Ig strand E 181..185 CDD:409353 0/3 (0%)
Ig strand F 195..200 CDD:409353 2/4 (50%)
Ig 220..308 CDD:472250 23/90 (26%)
Ig strand B 236..240 CDD:409353 1/3 (33%)
Ig strand C 249..253 CDD:409353 0/3 (0%)
Ig strand E 275..279 CDD:409353 1/4 (25%)
Ig strand F 289..294 CDD:409353 2/4 (50%)
Ig strand G 302..305 CDD:409353 0/2 (0%)

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