DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and Dscam3

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_996226.2 Gene:Dscam3 / 42103 FlyBaseID:FBgn0261046 Length:2087 Species:Drosophila melanogaster


Alignment Length:322 Identity:74/322 - (22%)
Similarity:116/322 - (36%) Gaps:71/322 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PINNSTVPVGRDALLTCVVHDLVSFKVAWLRVDTQTILSIQNHVITKNHRISISHTEHRIWQLKI 100
            |:....|..|.|..|.|.:.........|.||.....|    :.|..:.|:.:|.|     .|.|
  Fly   252 PVMEIHVERGNDVHLPCNIQGNPFPIFTWYRVSDSAAL----YPIPSSQRVILSRT-----LLLI 307

  Fly   101 RDVQESDRGWYMCQINTDPMKSQMG------------YLDVVVPPDIVDYQTSQDVVRSTGQNVT 153
            ::..|.|.|.::||.:     :|.|            |:.|.:.|.:       .:|.| |....
  Fly   308 KNADERDAGKWICQAS-----NQFGEQRIEIRLSVNSYVSVHILPQV-------QIVNS-GGTAN 359

  Fly   154 LTCSATGVPMPTITWRREEATPILISD---DGDREVFSVEGQNLTLWQVQRSHMGAYLCIASNGV 215
            ..|:.||..:..|.| .....|:..::   .|...:..:...:|.:..|.|...|.|.|:..|  
  Fly   360 FNCTTTGSAIDAIDW-LHNGKPLQANNALTTGRDNIRFLSKSSLLVQNVGRRDRGVYQCLVEN-- 421

  Fly   216 PPTVSKRVMLVVNFAPTIWTRYDTIY------VGLGQKLTLECITESQPASVNFWLRDSQLLQGG 274
             ...|.:.|..:....|:   .:.||      |..|..::|:|.....|.....||.|||.:.  
  Fly   422 -QRASAQAMAELKLGDTV---PELIYTFIEQNVRPGPLISLKCSASGSPPPQFAWLLDSQPIM-- 480

  Fly   275 SYESVSVDHVFRI----------VMRITLRPITKRDFGEYICRAKNAMGQTDRIITVHHKAK 326
               .||:.|.|.|          :..:.:..:...|.|.|.|.|.|:||      :|.|.|:
  Fly   481 ---DVSLHHRFAIGQFVDMSGDVISHLNISHVRPDDGGLYKCVASNSMG------SVQHSAR 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 21/85 (25%)
Ig 39..122 CDD:299845 20/82 (24%)
Ig 132..213 CDD:299845 17/83 (20%)
IG_like 141..227 CDD:214653 19/88 (22%)
IG_like 239..322 CDD:214653 25/98 (26%)
IGc2 245..313 CDD:197706 20/77 (26%)
Dscam3NP_996226.2 IG 56..133 CDD:214652
Ig 56..125 CDD:143165
I-set 246..337 CDD:254352 23/98 (23%)
Ig 264..334 CDD:143165 19/83 (23%)
I-set 345..433 CDD:254352 20/99 (20%)
Ig 358..431 CDD:143165 16/76 (21%)
Ig 456..533 CDD:143165 23/87 (26%)
IGc2 553..619 CDD:197706
I-set 634..724 CDD:254352
ig 645..712 CDD:278476
IG_like 734..815 CDD:214653
Ig 745..815 CDD:299845
I-set 820..913 CDD:254352
Ig 838..920 CDD:299845
FN3 917..1033 CDD:238020
FN3 1040..1142 CDD:238020
fn3 1150..1237 CDD:278470
FN3 1263..1345 CDD:238020
Ig 1350..1436 CDD:299845
IG_like 1358..1436 CDD:214653
FN3 1441..1530 CDD:238020
FN3 1542..1620 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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