DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-iota and kirrel1a

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001349348.1 Gene:kirrel1a / 405804 ZFINID:ZDB-GENE-040426-2126 Length:819 Species:Danio rerio


Alignment Length:350 Identity:82/350 - (23%)
Similarity:146/350 - (41%) Gaps:86/350 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLLLQSVCFSQASFSELNNSDPKFSGPINNSTVPVGRDALLTCVVHDLVSFKVAWLRVDTQTILS 74
            ||||.|:..   ||..:..:  :||....:.:|.:|:..:|:|||.: .|..|.|    |:..|:
Zfish     4 LLLLLSLAL---SFHRVRTA--RFSQEPADQSVVLGQRVVLSCVVFN-YSGIVQW----TKDGLA 58

  Fly    75 IQNHVITKNHRISISHTEHRI--------WQLKIRDVQESDRGWYMCQINTDPMKSQMGYLDVVV 131
            :.   |.::.|   :...:|:        :.|:|...:.||...|.||.....::|:...|.|::
Zfish    59 LG---IGEDLR---AWPRYRVLRLVDVGQYNLEISAAELSDDSLYECQATEAALRSRRAKLTVLI 117

  Fly   132 PPDIVDYQTSQDVVRSTGQNVTLTCSATGV-PMPTITWRRE--------EATPILISDDGDREVF 187
            |||....:.|.:::.:.|....::|.:.|. |...|.|:::        ..|.:|    .||:..
Zfish   118 PPDEPVIEGSPEILLTAGVPYNMSCVSRGAKPASVIEWQKDGLPIEGAVSTTEVL----PDRKRV 178

  Fly   188 SVE------------GQNLTLWQVQRSHMGAYLCIASN-GVPPTVSKRVMLVVNFAPTIWTRYDT 239
            :..            |:|.|             |:|:| .||......:.|.|:..|.:....:.
Zfish   179 TTRSYLPIQPLDTDTGKNFT-------------CVATNLAVPMGKRATITLNVHHPPVVTLSIEP 230

  Fly   240 IYVGLGQKLTLECITESQPASVNF-WLRDSQLLQGGSYESVSV---DHVFRIVMRITLRPITKRD 300
            ..|..|:::|..|...:.|..:.: |.:...::| |:.|||.|   ||.|               
Zfish   231 RSVLEGERVTFTCQATANPPIMGYKWAKGGVVIQ-GARESVFVTKADHSF--------------- 279

  Fly   301 FGEYI-CRAKNAMGQTD--RIITVH 322
            |.|.: |:..||:|.|:  .::.||
Zfish   280 FTEPVSCQVFNAVGSTNVSILVDVH 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 22/93 (24%)
Ig 39..122 CDD:299845 21/90 (23%)
Ig 132..213 CDD:299845 19/101 (19%)
IG_like 141..227 CDD:214653 20/107 (19%)
IG_like 239..322 CDD:214653 22/89 (25%)
IGc2 245..313 CDD:197706 19/72 (26%)
kirrel1aNP_001349348.1 I-set 21..115 CDD:333254 25/104 (24%)
Ig2_KIRREL3-like 137..218 CDD:143236 18/97 (19%)
I-set 222..303 CDD:333254 23/96 (24%)
Ig_3 307..372 CDD:316449
Ig5_KIRREL3 390..493 CDD:143306
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.