DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and rst

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster


Alignment Length:359 Identity:75/359 - (20%)
Similarity:140/359 - (38%) Gaps:72/359 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LPSFWLLLLQSVCFSQASFSELNNSDPKFSGPINNSTVPVGRDALLTCVVHDLVSFKVAWLRVD- 68
            |.:..||||.::.....|....:..:.:|:....:.|..||....|.|.|.:... .:.|.:.| 
  Fly     2 LHTMQLLLLATIVGMVRSSPYTSYQNQRFAMEPQDQTAVVGARVTLPCRVINKQG-TLQWTKDDF 65

  Fly    69 ----TQTILSIQNHVITKNHRISISHTEHRIWQLKIRDVQESDRGWYMCQINTDP-----MKSQM 124
                ::.:...:.:.:       :...|...:.|.|..|...|...|.||::..|     ::|..
  Fly    66 GLGTSRDLSGFERYAM-------VGSDEEGDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIRSTF 123

  Fly   125 GYLDVVVPPDIVDYQTSQDVVRST-GQNVTLTC-SATGVPMPTITWRREEATPILISDDGDREVF 187
            ..|.|:|||:.... |..||:.:| .:.|.:.| |..|.|...|||  .:....:::|:.:..|.
  Fly   124 AGLTVLVPPEAPKI-TQGDVIYATEDRKVEIECVSVGGKPAAEITW--IDGLGNVLTDNIEYTVI 185

  Fly   188 SVEGQN-------LTLWQVQRSHMGAYLCIASNGVPPTV-SKRVMLVVNFAPTIWTRY------- 237
            .:..|.       |.|...:..|...:.|.|.|....|. |.::.:.|.:||.:....       
  Fly   186 PLPDQRRFTAKSVLRLTPKKEHHNTNFSCQAQNTADRTYRSAKIRVEVKYAPKVKVNVMGSLPGG 250

  Fly   238 ----------DTIYVGLGQKLT------LECITESQPASVNF-W-LRDSQLLQGGSYESVSVDHV 284
                      .::::..|.::.      |||..::.|:.|.: | :.|..::.|...|.|     
  Fly   251 AGGSVGGAGGGSVHMSTGSRIVEHSQVRLECRADANPSDVRYRWFINDEPIIGGQKTEMV----- 310

  Fly   285 FRIVMRITLRPITKRDFGEYI--CRAKNAMGQTD 316
                    :|.:| |.|.:.|  |..:|::|:::
  Fly   311 --------IRNVT-RKFHDAIVKCEVQNSVGKSE 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 18/95 (19%)
Ig 39..122 CDD:299845 17/92 (18%)
Ig 132..213 CDD:299845 22/89 (25%)
IG_like 141..227 CDD:214653 22/95 (23%)
IG_like 239..322 CDD:214653 19/88 (22%)
IGc2 245..313 CDD:197706 18/77 (23%)
rstNP_001284835.1 IG_like 34..130 CDD:214653 20/103 (19%)
Ig 42..114 CDD:299845 14/79 (18%)
C2-set_2 135..225 CDD:285423 22/92 (24%)
Ig_3 265..329 CDD:290638 17/77 (22%)
I-set 346..420 CDD:254352
Ig 360..425 CDD:299845
Ig5_KIRREL3-like 428..524 CDD:143235
IG_like 435..524 CDD:214653
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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