DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and sdk

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001284756.1 Gene:sdk / 31017 FlyBaseID:FBgn0021764 Length:2265 Species:Drosophila melanogaster


Alignment Length:340 Identity:75/340 - (22%)
Similarity:121/340 - (35%) Gaps:76/340 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PKFSGPINNSTV-PVGRDALLTCVVHDLVSFKVAWLRVDTQTILSIQNHVITKNHRISISHTEHR 94
            |.|..|:...|. ..|....|||.|....:.:|.|.|    ...|:..|:.:..:.::..:|   
  Fly   360 PLFFTPMRAETFGEFGGQVQLTCDVVGEPTPQVKWFR----NAESVDAHIESGRYTLNTDNT--- 417

  Fly    95 IWQLKIRDVQESDRGWYMC-QINTDPMKSQMGYLDV-----------VVPPDIVDYQTS------ 141
               |.|:.:...|...:.| .||.....|...:|.|           :..|.|:..:.|      
  Fly   418 ---LVIKKLILDDAAMFQCLAINEAGENSASTWLRVKTKTAKNRVKRLAQPRILRVRASHAGLGS 479

  Fly   142 ---------------------------QDVVRSTGQNVTLTCSATGVPMPTITWRREEATPILIS 179
                                       |:|....|::.|::|.|.|.|.|.|||...|...:.||
  Fly   480 EKGSESGSSDRRKEFRFASAPIMELPPQNVTALDGKDATISCRAVGSPNPNITWIYNETQLVDIS 544

  Fly   180 DDGDREVFSVEGQNLTLWQVQRSHMGAYLCIASNGVPPTVSKRVMLVVNFAPTIWTRYDTIYVGL 244
            .    .|..:|..:|.:..::....|.|:|:.:|.......:..:.|:.....|....||. |.|
  Fly   545 S----RVQILESGDLLISNIRSVDAGLYICVRANEAGSVKGEAYLSVLVRTQIIQPPVDTT-VLL 604

  Fly   245 GQKLTLECITESQPASVNF---WLRDSQLLQGGSYESVSVDHVFRIVM----RITLRPITKRDFG 302
            |...||:|...|.| ||.:   |.|:.|       .|..:.:..||.:    ::.::.:...|.|
  Fly   605 GLTATLQCKVSSDP-SVPYNIDWYREGQ-------SSTPISNSQRIGVQADGQLEIQAVRASDVG 661

  Fly   303 EYICRAKNAMGQTDR 317
            .|.|...:..|...|
  Fly   662 SYACVVTSPGGNETR 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 19/87 (22%)
Ig 39..122 CDD:299845 18/84 (21%)
Ig 132..213 CDD:299845 24/113 (21%)
IG_like 141..227 CDD:214653 23/118 (19%)
IG_like 239..322 CDD:214653 23/86 (27%)
IGc2 245..313 CDD:197706 18/74 (24%)
sdkNP_001284756.1 Ig 71..157 CDD:299845
I-set 72..150 CDD:254352
Ig 172..245 CDD:299845
IG_like 280..356 CDD:214653
Ig 280..343 CDD:299845
IG_like 375..450 CDD:214653 19/84 (23%)
Ig 378..447 CDD:143165 17/78 (22%)
Ig 506..587 CDD:299845 22/84 (26%)
IG_like 506..587 CDD:214653 22/84 (26%)
I-set 592..682 CDD:254352 25/94 (27%)
Ig 595..682 CDD:299845 24/91 (26%)
FN3 686..789 CDD:238020
FN3 798..893 CDD:238020
FN3 901..1005 CDD:238020
fn3 1011..1094 CDD:278470
FN3 1108..1202 CDD:238020
FN3 1210..1308 CDD:238020
fn3 1317..1402 CDD:278470
FN3 1415..1507 CDD:238020
FN3 1513..1608 CDD:238020
fn3 1617..1708 CDD:278470
FN3 1722..1823 CDD:238020
FN3 1828..1920 CDD:238020
FN3 1927..2016 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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