DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and Lrit3

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001274153.1 Gene:Lrit3 / 242235 MGIID:2685267 Length:681 Species:Mus musculus


Alignment Length:385 Identity:69/385 - (17%)
Similarity:115/385 - (29%) Gaps:177/385 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RRLPS---FWLLLLQSVCFSQASFSELNNS---------DPKFSGPI------------------ 37
            ||||:   ::|:.||.:..:..|.:.:..|         :.:..|..                  
Mouse    70 RRLPAEAFYYLVELQYLWLAYNSVASIETSSFYNLRQLHELRLDGNSLTAFPWVSLLDMPHLRTL 134

  Fly    38 ---NNSTVPVGRDAL-----LTCVVHDLVSFKVAWLRVDTQTILSIQNHVITKNHRISISHTEHR 94
               ||....|..:|:     |||:  ||.|.::..|..|   .|...:|:.....| |......|
Mouse   135 DLHNNRIASVPNEAVRYLRNLTCL--DLSSNRLTTLPPD---FLDSWSHLAVTPSR-SPDFPPRR 193

  Fly    95 IWQLKIRDVQESDRGWYM-CQIN---------------TDPMK------------SQMGYLDVVV 131
            |    |..:|  |..|:. |.|:               .||:.            .|...|:..:
Mouse   194 I----ILGLQ--DNPWFCDCHISKVIELSKVTDHAVVLLDPLMVCSEPERFQGILFQRVELEKCL 252

  Fly   132 PPDIVDYQTSQDVVRSTGQNVTLTCSATGVPMPTITWRREEATPILISDDGDREVFSVEGQNLTL 196
            .|.::  .::..:..:.|.||.|.|.|.|.|.|.:||.|.:.:.:                |.|:
Mouse   253 KPSVM--MSATKITSALGSNVLLRCDAKGHPTPQLTWTRSDGSTV----------------NYTV 299

  Fly   197 WQVQRSHMGAYLCIASNGVPPTVSKRVMLVVNFAPTIWTRYDTIYVGLGQKLTLECITESQPASV 261
                                                                    |.||....:
Mouse   300 --------------------------------------------------------IQESPGEGI 308

  Fly   262 NFWLRDSQLLQGGSYESVSVDHVFRIVMRITLRPITKRDFGEYICRAKNAMGQTDRIITV 321
            .:.:                         |:|..|:.:|.|:|.|:|||..|.::.::||
Mouse   309 RWSI-------------------------ISLTSISHKDAGDYRCKAKNLAGISEAVVTV 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 26/118 (22%)
Ig 39..122 CDD:299845 25/115 (22%)
Ig 132..213 CDD:299845 15/80 (19%)
IG_like 141..227 CDD:214653 14/85 (16%)
IG_like 239..322 CDD:214653 16/83 (19%)
IGc2 245..313 CDD:197706 13/67 (19%)
Lrit3NP_001274153.1 LRR 1. /evidence=ECO:0000255 56..79 4/8 (50%)
LRR_8 61..117 CDD:290566 10/46 (22%)
LRR 2. /evidence=ECO:0000255 80..103 5/22 (23%)
leucine-rich repeat 83..106 CDD:275378 4/22 (18%)
LRR 3. /evidence=ECO:0000255 104..128 1/23 (4%)
LRR_8 105..165 CDD:290566 11/61 (18%)
LRR_4 106..146 CDD:289563 4/39 (10%)
leucine-rich repeat 107..130 CDD:275378 1/22 (5%)
LRR_4 129..170 CDD:289563 11/42 (26%)
LRR 4. /evidence=ECO:0000255 129..151 4/21 (19%)
leucine-rich repeat 131..154 CDD:275378 4/22 (18%)
LRR 5. /evidence=ECO:0000255 152..175 9/27 (33%)
leucine-rich repeat 155..168 CDD:275378 6/14 (43%)
Ig 254..335 CDD:299845 28/179 (16%)
IG_like 263..339 CDD:214653 28/172 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 350..391
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 425..464
FN3 489..563 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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