DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-iota and wrk-1

DIOPT Version :10

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001024651.1 Gene:wrk-1 / 181093 WormBaseID:WBGene00006942 Length:452 Species:Caenorhabditis elegans


Alignment Length:376 Identity:76/376 - (20%)
Similarity:137/376 - (36%) Gaps:104/376 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 GRDALLTCVVHDLVSFKVAWLRVDTQTILSIQNHVITKNHRISISHTEHRIWQLKIRDVQESDRG 109
            |....|.|.|.| .|..:.| |.:|: ::::.:.::.......|| .|.....|.|:.|:..:..
 Worm    32 GESLTLRCEVED-PSVAIIW-RKNTE-VVAVDDEILDTYGGYEIS-MEGSTSVLTIKRVEPINSA 92

  Fly   110 WYMC---------------------QINTDPMKSQMGYLDVVVPPDIVDYQTSQDVVRSTGQNVT 153
            .|.|                     |::..|:        ||:.||...|.     .|...:|:.
 Worm    93 NYSCALAEPEVSVTFVIKVQV
FKPTQVSVKPL--------VVISPDTGVYH-----ARVGEKNLV 144

  Fly   154 LTCSA-TGVPMPTITWRREEATPILISDDGDREVFSVEGQNLTLWQVQRSHMGAYLCIASN--GV 215
            :||.. .|.|.|.:.|.::.|.   :.:|..||   ..|..:.:.:|::.|.|.|.|:|.|  | 
 Worm   145 ITCHVKEGNPKPGVVWTKQAAK---LPEDIKRE---HGGARIVITEVKKHHAGKYNCLAENIAG- 202

  Fly   216 PPTVSKRVMLVVNFAPTI--------WTRYDTIYVGL--GQKLTLECITESQPASVNFWL----- 265
                |.|..:.::.|..:        |.:.:..::.:  .|..:..|..:..|.....||     
 Worm   203 ----SDRATIDIHV
AEPLQGEREEKPWVKNEDTFIPVRKNQNASFWCTYDGTPVPQVEWLFNGYK 263

  Fly   266 ------------RDSQLLQGGSYESVSVDHVFRIVMRITLRPITKRDFGEYICRAKNAMGQTDRI 318
                        ..:|.|.|.|..:            :|:..|::..||:|.||..|.:|....:
 Worm   264 INFNDEKFKKTSETAQRLNGYSKST------------LTVGDISEEAFGDYACRISNKLGSVTAV 316

  Fly   319 ITVHHKAKKHGQHSHQTSSRESQFI--------VIEEYIANMSDKSCSFQP 361
            :   |.:.:.|  ..|.|..||:..        ::|..:.:..:.:..|.|
 Worm   317 V---HVSGRPG--PPQLSFDESELTWTVRAFDKILEYQLCHRLENADHFLP 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 19/100 (19%)
Ig strand B 48..52 CDD:143290 1/3 (33%)
Ig strand C 61..65 CDD:143290 0/3 (0%)
Ig strand E 96..100 CDD:143290 1/3 (33%)
Ig strand F 110..115 CDD:143290 2/25 (8%)
Ig 133..227 CDD:472250 26/96 (27%)
Ig strand B 152..156 CDD:409562 0/3 (0%)
Ig strand C 165..169 CDD:409562 0/3 (0%)
Ig strand E 192..196 CDD:409562 0/3 (0%)
Ig strand F 206..211 CDD:409562 2/4 (50%)
Ig strand G 220..223 CDD:409562 1/2 (50%)
Ig_3 231..310 CDD:464046 17/105 (16%)
wrk-1NP_001024651.1 IG_like 25..113 CDD:214653 17/84 (20%)
Ig strand B 35..39 CDD:409353 1/3 (33%)
Ig strand C 47..51 CDD:409353 1/4 (25%)
Ig strand E 77..83 CDD:409353 1/5 (20%)
Ig strand F 93..98 CDD:409353 2/4 (50%)
Ig strand G 104..107 CDD:409353 0/2 (0%)
Ig 136..212 CDD:472250 23/86 (27%)
Ig strand B 143..147 CDD:409353 0/3 (0%)
Ig strand C 157..161 CDD:409353 0/3 (0%)
Ig strand E 178..182 CDD:409353 0/3 (0%)
Ig strand F 192..197 CDD:409353 2/4 (50%)
Ig 235..319 CDD:472250 18/98 (18%)
Ig strand C 254..258 CDD:409353 0/3 (0%)
Ig strand E 278..291 CDD:409353 4/24 (17%)
Ig strand F 301..306 CDD:409353 2/4 (50%)
Ig strand G 314..317 CDD:409353 0/2 (0%)

Return to query results.
Submit another query.