DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and rig-3

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_509155.1 Gene:rig-3 / 180958 WormBaseID:WBGene00004370 Length:487 Species:Caenorhabditis elegans


Alignment Length:394 Identity:80/394 - (20%)
Similarity:144/394 - (36%) Gaps:83/394 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRRLPSFWLLLLQSVCFSQASFSELNNSDPKFSGPI-----------NNSTVPVGRDALLTCV- 53
            |||.|..  :|...::|...::.|..::.....:.||           |..||..|:..:::|| 
 Worm     1 MGRLLAK--MLFPLAMCLFVSAVSASDSPSSNEANPIVISSEAMDYDTNTITVREGKKLMVSCVF 63

  Fly    54 -----VH--DLVSFKVAWLRVDTQTILSIQNHVITKNHRISISHTEHRIWQLKIRDVQESDRGWY 111
                 :|  ||:..:.....:|.::..|:.:.::.:      ..::||...|....|...|.|.|
 Worm    64 ESDEQIHKSDLLWKQANGNNIDGESNPSLFSVILNE------KGSKHRKTSLHFSSVHTRDTGLY 122

  Fly   112 MCQINTDPMKSQMGYLDVVVPPDIVDYQTSQDVVRST--GQNVTLTCSATGVPM---PTITWRRE 171
            .|...|...::....:.:||.|.|  ....:|.|:..  |:.:|:.|...| |.   |.|.....
 Worm   123 TCTGRTAGGENFEKTIKLVVLPAI--EWNDKDTVKGALLGEPITIDCGVKG-PSGKEPMIQMTNG 184

  Fly   172 EATPILISDDGDREVFSVEGQNLTLWQVQRSHMGAYL-CI--------ASNGVPPTVSKRVMLVV 227
            ...|:      |.|::::.|...|:..:::.|....: ||        :....|....|.|.:.|
 Worm   185 NGEPL------DEEIWTIAGNEATIDSLKKEHAELTVSCITIEMHQETSKEEFPVVDRKDVNIEV 243

  Fly   228 NFAPTIWTRYDTIYVGLGQKL---TLEC-ITESQPASVNFWLRDSQLLQGGSYESVSVDHVFRIV 288
            ...|...|.....|..:...:   .:.| :|.|.|.     :|......|.  |.:.:...|.|.
 Worm   244 YTLPEFETEESVQYTVIDNHVRDAIIYCNVTHSFPP-----VRHYTFYHGD--EEIKMSDKFNIF 301

  Fly   289 MRI--------TLRPITKRDFGEYICRAKNAMGQTDRIITVHHKAKK-HGQHSHQTSS-RESQFI 343
            :.:        .:..:.:.|.|.|.|.|.|.            |||. |..|..:.:: .|.:..
 Worm   302 VNVGVSQGAHLKIHNVNENDLGTYKCEANNI------------KAKSYHTIHLREANAPAEPKVT 354

  Fly   344 VIEE 347
            :||:
 Worm   355 LIED 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 19/93 (20%)
Ig 39..122 CDD:299845 19/90 (21%)
Ig 132..213 CDD:299845 19/94 (20%)
IG_like 141..227 CDD:214653 20/99 (20%)
IG_like 239..322 CDD:214653 16/94 (17%)
IGc2 245..313 CDD:197706 15/79 (19%)
rig-3NP_509155.1 IG_like 48..142 CDD:214653 19/99 (19%)
Ig 267..341 CDD:319273 19/92 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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