DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and Dscaml1

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001074739.2 Gene:Dscaml1 / 114873 MGIID:2150309 Length:2053 Species:Mus musculus


Alignment Length:352 Identity:93/352 - (26%)
Similarity:141/352 - (40%) Gaps:60/352 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SELNNSDPKFSGPINNSTVPVGRDALLTCVVHDLVSFKVAWLRVDTQTILSIQNH--VITKNHRI 86
            :.:|...|.....:.|.|...|||.|:.|.|.....:.:.|.:   ..:|...||  |:.:|   
Mouse   498 ARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYK---DALLLPDNHRQVVFEN--- 556

  Fly    87 SISHTEHRIWQLKIRDVQES-DRGWYMCQINTDPMK--SQMGYLDVVVPPDIVDYQTSQDVVRST 148
                     ..||:.|||:. |.|.|:|.:...|..  ||..::.|.|||.|..::...   .|.
Mouse   557 ---------GTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQPFEFPP---ASI 609

  Fly   149 GQNVTLTCSATGVPMP-TITWRREEATPILISDDG----DREVFSVEGQNLTLWQVQRSHMGAYL 208
            ||.:.:.|..:...|| .||||::  ..::||..|    .:|..|    :|.:..|...|.|.|.
Mouse   610 GQLLYIPCVVSSGDMPIRITWRKD--GQVIISGSGVTIESKEFMS----SLQISSVSLKHNGNYT 668

  Fly   209 CIASNGVPPTVSKRVMLVVNFAPTIWTR---YDTIYVGLGQKLTLECITESQPASVNFWLRDSQL 270
            |||||.. .|||:...|:|...|....:   .|.||   |:...|.|..:..|.....|......
Mouse   669 CIASNAA-ATVSRERQLIVRVPPRFVVQPNNQDGIY---GKAGVLNCSVDGYPPPKVMWKHAKGS 729

  Fly   271 LQGGSYESVSVDHVFRIV--MRITLRPITKRDFGEYICRAKNAMGQTD------------RIITV 321
            .....|..|.:....:|:  ..:.:|.:.:.|.|.|:|:|.|.:| ||            .:||.
Mouse   730 GNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVG-TDISKAMFLTVKIPAMITS 793

  Fly   322 HHKA----KKHGQHSHQTSSRESQFIV 344
            |...    |.|.:..:.|:..|...|:
Mouse   794 HPNTTIAIKGHPKELNCTARGERPIII 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 26/90 (29%)
Ig 39..122 CDD:299845 24/87 (28%)
Ig 132..213 CDD:299845 26/85 (31%)
IG_like 141..227 CDD:214653 29/90 (32%)
IG_like 239..322 CDD:214653 22/96 (23%)
IGc2 245..313 CDD:197706 15/69 (22%)
Dscaml1NP_001074739.2 IGc2 43..110 CDD:197706
Ig 125..218 CDD:353325
I-set 226..311 CDD:336764
Ig_3 317..389 CDD:339005
Ig 408..498 CDD:353325 93/352 (26%)
IGc2 519..577 CDD:197706 21/72 (29%)
Ig 615..681 CDD:319273 25/72 (35%)
Ig_DSCAM 707..785 CDD:143211 17/78 (22%)
Ig 803..891 CDD:353325 4/18 (22%)
FN3 887..981 CDD:238020
FN3 988..1085 CDD:238020
FN3 1093..1186 CDD:238020
FN3 1191..1282 CDD:238020
Ig 1307..1377 CDD:319273
FN3 1384..1474 CDD:238020
FN3 1488..1560 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1716..1741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1773..1803
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1840..1862
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1974..2053
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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