DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and ntm

DIOPT Version :10

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_004916061.1 Gene:ntm / 100492453 XenbaseID:XB-GENE-6045425 Length:374 Species:Xenopus tropicalis


Alignment Length:377 Identity:113/377 - (29%)
Similarity:172/377 - (45%) Gaps:58/377 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLLLQSVCFSQASFSELNNSDPKFSGPINNSTVPVGRDALLTCVVHDLVSFKVAWLRVDTQTILS 74
            |.|||.|        .:.:.|..|...::|.||..|..|:|.|.|.:.|: :||||  :..|||.
 Frog    24 LCLLQGV--------PVRSGDAGFPKAMDNVTVRQGDSAILRCTVDNRVT-RVAWL--NRSTILY 77

  Fly    75 IQNHVITKNHRISISHTEHRIWQLKIRDVQESDRGWYMCQINTD--PMKSQMGYLDVVVPPDIVD 137
            ..|...:.:.|:.:.......:.::|::|...|.|.|.|.:.||  |..|:: :|.|.|||.|||
 Frog    78 TGNDKWSIDPRVVLLANTKSQYSIEIQNVDIYDEGPYTCSVQTDNHPKTSRV-HLIVQVPPRIVD 141

  Fly   138 YQTSQDVVRSTGQNVTLTCSATGVPMPTITWRREEATPILISDDGDREVFSVEGQNLTLWQVQRS 202
            ..:|  :..:.|.||:|.|.|.|.|.|.:.||  ..:|       ....|..|.:.|.:..:.|.
 Frog   142 ISSS--IAVNEGSNVSLICIANGRPEPVVNWR--YLSP-------KARGFVSEDEYLEITGITRE 195

  Fly   203 HMGAYLCIASNGVPPTVSKRVMLVVNFAPTIWTRYDTIYVG--LGQKLTLECITESQPASVNFWL 265
            ..|.|.|.|||.|.....:||.|.||:.|.|   .|...:|  ||.:..|:|...:.||:..||.
 Frog   196 QSGIYECSASNDVSAPDVRRVKLTVNYPPYI---LDAQNIGAPLGHRGILQCEASAVPAADFFWY 257

  Fly   266 RDSQLLQGGSYESVSVDHVFRIVMRITLRPITKRDFGEYICRAKNAMGQTDRIITVHHKAKKHGQ 330
            ::.:.| ..|:..|.|:: ...:.|:|...::::|:|.|.|.|||.:|.::..|.:.       :
 Frog   258 KEDKRL-SDSWRGVKVEN-RETISRVTFLNVSEQDYGNYTCMAKNLLGHSNASIILF-------E 313

  Fly   331 HSHQTSSRESQFIVIEEYIA--------------NMSDKSCSF-QPLWIMFL 367
            ....|||.    ::.||..|              |.....||| .||.|:.|
 Frog   314 LFQSTSSP----LLQEESTAALTPLKGPGAVHDGNSGSTQCSFCAPLLILLL 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 28/87 (32%)
Ig strand B 48..52 CDD:143290 2/3 (67%)
Ig strand C 61..65 CDD:143290 2/3 (67%)
Ig strand E 96..100 CDD:143290 0/3 (0%)
Ig strand F 110..115 CDD:143290 2/4 (50%)
Ig 133..227 CDD:472250 31/93 (33%)
Ig strand B 152..156 CDD:409562 2/3 (67%)
Ig strand C 165..169 CDD:409562 0/3 (0%)
Ig strand E 192..196 CDD:409562 1/3 (33%)
Ig strand F 206..211 CDD:409562 2/4 (50%)
Ig strand G 220..223 CDD:409562 0/2 (0%)
Ig_3 231..310 CDD:464046 23/80 (29%)
ntmXP_004916061.1 Ig 45..133 CDD:472250 29/91 (32%)
Ig strand B 54..58 CDD:409353 2/3 (67%)
Ig strand C 66..70 CDD:409353 2/3 (67%)
Ig strand E 99..103 CDD:409353 0/3 (0%)
Ig strand F 113..118 CDD:409353 2/4 (50%)
Ig strand G 126..129 CDD:409353 1/2 (50%)
Ig_3 136..206 CDD:464046 26/80 (33%)
ig 227..311 CDD:395002 25/85 (29%)
Ig strand B 240..244 CDD:409353 1/3 (33%)
Ig strand C 253..257 CDD:409353 1/3 (33%)
Ig strand E 279..283 CDD:409353 1/3 (33%)
Ig strand F 293..298 CDD:409353 2/4 (50%)

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