DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and ncam2

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_012811963.1 Gene:ncam2 / 100151722 XenbaseID:XB-GENE-1217730 Length:865 Species:Xenopus tropicalis


Alignment Length:355 Identity:90/355 - (25%)
Similarity:143/355 - (40%) Gaps:76/355 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NSTVPVGRDALLTCVVHDLVSFKVAWLRVDTQTILSIQNHVITKNHRISI--SHTEHRIWQLKIR 101
            |:|.....|..|.|.........:.|.|         ...::.:|.:..:  .:||     |.::
 Frog   248 NATADRLEDITLFCRATGSPKPYITWHR---------NGKLVEENEKYDLREDNTE-----LTVK 298

  Fly   102 DVQESDRGWYMCQ-INTDPMKSQMGYLDVVVPPDIVDYQTSQDVVRSTGQNVTLTCSATGVPMPT 165
            ::..:|.|.|:|: .|......:..:|.|.|.|.||..|....:...   :|||||.|.|.|:|.
 Frog   299 NIISTDSGLYVCRATNKAGFTEKQSFLQVFVQPHIVQLQNETTIEHG---HVTLTCEAEGEPIPE 360

  Fly   166 ITWRREEATPILISDDGDREVFSVEGQ----------NLTLWQVQRSHMGAYLCIASNGVPPTVS 220
            |||:|  ::..:|..|||:   |.:|:          :|.:..|..|..|.|.|.|::.:... .
 Frog   361 ITWKR--SSDGMIFYDGDK---SQDGRIESTGHHGKSSLHIKSVMLSDAGRYDCEAASRIGGH-Q 419

  Fly   221 KRVMLVVNFAPTIWTRYDTIYVGLGQKLTLECITESQPASVNFWLRDSQLLQGGSYESVSV--DH 283
            |.:.|.:.:||...:.....|......:.:.|...|.|.|..:|.||..||...:..::..  |.
 Frog   420 KSMYLNIEYAPKFISNQTIYYSWENNPINISCDVTSNPPSSIYWSRDKLLLPARNITNIKTYRDG 484

  Fly   284 VFRIVMRITLRPITKRDFGEYICRAKNAMGQTDRIITVHHKAKKHGQHSHQTSSRESQFIVIEEY 348
            . ||::.||  |::..|||.|.|.|.|::|                       ||      |:||
 Frog   485 K-RILLEIT--PLSDNDFGRYNCTAINSIG-----------------------SR------IQEY 517

  Fly   349 IANMSDKSCSFQPLWIMFL------CFVNK 372
            |..::|...|...|.::.|      .|.||
 Frog   518 ILTLADVPSSPYGLRVIELSQTYAKVFFNK 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 16/88 (18%)
Ig 39..122 CDD:299845 16/85 (19%)
Ig 132..213 CDD:299845 30/90 (33%)
IG_like 141..227 CDD:214653 28/95 (29%)
IG_like 239..322 CDD:214653 24/84 (29%)
IGc2 245..313 CDD:197706 22/69 (32%)
ncam2XP_012811963.1 Ig 50..141 CDD:386229
IG_like 150..234 CDD:214653
Ig 237..330 CDD:386229 18/95 (19%)
Ig 329..426 CDD:386229 33/105 (31%)
IG_like 442..520 CDD:214653 29/109 (27%)
FN3 525..617 CDD:238020 6/23 (26%)
fn3 623..706 CDD:365830
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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