DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and lsamp

DIOPT Version :10

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_031751462.1 Gene:lsamp / 100124984 XenbaseID:XB-GENE-5759171 Length:368 Species:Xenopus tropicalis


Alignment Length:374 Identity:75/374 - (20%)
Similarity:122/374 - (32%) Gaps:117/374 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1702 LLLRQLSVLSAL--LQGRAHMDLHVLR--------SEYHFHLFHQVMGILELLAPL--VYRDCYR 1754
            ||:|.:|:..||  :|...:.||..|:        ....|..:...:|.|..|...  ...:|||
 Frog   252 LLIRGVSLPGALTGIQFYLYPDLSRLQDPQVWMDAGTQIFFSYAICLGCLTALGSYNKYNNNCYR 316

  Fly  1755 EGLQNGLDCFFQLLKHHGTFKESYTLIYRFVEFLQAYIG------ANPATAIAFVEQ-------- 1805
                   ||......:.||...:...|:..:.|:....|      |.....:||:..        
 Frog   317 -------DCVALCFLNSGTSFVAGFAIFSILGFMAEEQGVHISDVAESGPGLAFIAYPRAVSMMP 374

  Fly  1806 ----------YSDVLIDLAHQHFDLHAL------------------QQLVQGLSMLRHTTGGASM 1842
                      :..:|:.|..|...:.:|                  :.|:.|:||:....|...:
 Frog   375 FSPLWACFFFFMVILLGLDSQFVCVESLVTAVVDMYPTIFRKKNRRELLILGVSMISFLVGLIML 439

  Fly  1843 RKHSSGGGILADL-DQLAAS------AATYEASM------SDSRAIVDAGE-TAGGKPPGSNAAV 1893
               :.||..:..| |..|||      .|.:|...      :|:  ..|..| ..|.:|.|.....
 Frog   440 ---TEGGMYVFQLFDYYAASGMCLLFVAIFETLCVGWVYGADN--FYDKVEHMIGYRPTGIIKYC 499

  Fly  1894 GLMLAPAI------------------RNDLLPTHWTELVAVLRSRDIDEISIPLMELDALSVKRP 1940
            .|.:.||:                  ::.:.| .|.:.:..|.:.. ..:.|||.....||..:.
 Frog   500 WLFVTPAVCMATFLFSLVKYTPLTYNKHYVYP-WWGDAIGWLLALS-SMVCIPLWVGYKLSTIKG 562

  Fly  1941 ALLEDIFDDVIRFVQ--HPSPTTRQMAHNLVTRWLKQNPGSVSSNGTAL 1987
            :|:|       ||.|  .|.|...|..        :..|.|.::.||.|
 Frog   563 SLME-------RFRQLTFPDPDLPQKT--------QCEPLSQTAQGTLL 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653
Ig strand B 48..52 CDD:143290
Ig strand C 61..65 CDD:143290
Ig strand E 96..100 CDD:143290
Ig strand F 110..115 CDD:143290
Ig 133..227 CDD:472250
Ig strand B 152..156 CDD:409562
Ig strand C 165..169 CDD:409562
Ig strand E 192..196 CDD:409562
Ig strand F 206..211 CDD:409562
Ig strand G 220..223 CDD:409562
Ig_3 231..310 CDD:464046
lsampXP_031751462.1 Ig 38..128 CDD:472250
Ig strand B 49..53 CDD:409353
Ig strand C 61..65 CDD:409353
Ig strand E 94..98 CDD:409353
Ig strand F 108..113 CDD:409353
Ig strand G 121..124 CDD:409353
Ig_3 131..206 CDD:464046
Ig_3 223..302 CDD:464046 12/49 (24%)
Blue background indicates that the domain is not in the aligned region.

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