DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-iota and dscaml1

DIOPT Version :9

Sequence 1:NP_001097100.1 Gene:DIP-iota / 33925 FlyBaseID:FBgn0031837 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_005157551.1 Gene:dscaml1 / 100002762 -ID:- Length:2158 Species:Danio rerio


Alignment Length:355 Identity:86/355 - (24%)
Similarity:133/355 - (37%) Gaps:65/355 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SELNNSDPKFSGPINNSTVPVGRDALLTCVVHDLVSFKVAWLRVDTQTILSIQNHVITKNHRISI 88
            :.:|...|.....:.|.|...||:..:.|.|.....:.:.|.:         ...::..|||   
Zfish   567 ARINVRGPPSIRAMRNITAVAGRNTFINCRVIGYPYYSIKWYK---------DGMLLPDNHR--- 619

  Fly    89 SHTEHRIWQLKIRDVQES-DRGWYMCQINTDPMK--SQMGYLDVVVPPDI--VDYQTSQDVVRST 148
             ...:....||:.|||:. |.|.|:|.:...|..  ||..|:.|.|||.|  .|:..:     |.
Zfish   620 -QVVYENGTLKLSDVQKGMDEGAYLCSVLIQPQLSISQTVYVTVKVPPLIQPFDFPPT-----SI 678

  Fly   149 GQNVTLTCSATGVPMP-TITWRREEATPILISDDGDREVFSVEG---------QNLTLWQVQRSH 203
            |:.:.:.|..:...|| .||||:          ||...|....|         .:|.:.:|...|
Zfish   679 GKLMYIACVVSSGDMPIRITWRK----------DGQEIVSGTAGVTIETKEFMSSLQISKVSLKH 733

  Fly   204 MGAYLCIASNGVPPTVSKRVMLVVNFAPTIWTR---YDTIYVGLGQKLTLECITESQPASVNFWL 265
            .|.|.|||||.. .|||....|:|...|....:   .|.||   |:...|.|..|..|.....|.
Zfish   734 NGNYTCIASNDA-ATVSSERQLIVTVPPRFRVQPNNQDGIY---GKSEVLNCSVEGYPPPKVVWK 794

  Fly   266 RDSQLLQGGSYESVSVDHVFRIVMR--ITLRPITKRDFGEYICRAKNAMG-----------QTDR 317
            ....:.....|..|.:....:|:..  :.:|.:.:.|.|.|:|:|.|.:|           :...
Zfish   795 HAKGIGNPQQYHPVPLTGRIQILSNGSLLIRHVLEEDRGYYLCQASNGVGSDISKSMMLTVKIPA 859

  Fly   318 IITVHHKAKK--HGQHSHQTSSRESQFIVI 345
            :||.|.....  .||:.....:...::.:|
Zfish   860 MITSHPNTTMAIKGQNKELNCTARGEYPII 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-iotaNP_001097100.1 IG_like 39..125 CDD:214653 22/88 (25%)
Ig 39..122 CDD:299845 20/85 (24%)
Ig 132..213 CDD:299845 25/92 (27%)
IG_like 141..227 CDD:214653 27/95 (28%)
IG_like 239..322 CDD:214653 21/95 (22%)
IGc2 245..313 CDD:197706 16/69 (23%)
dscaml1XP_005157551.1 IG_like 112..184 CDD:214653
Ig 112..183 CDD:143165
Ig 194..287 CDD:299845
I-set 302..380 CDD:254352
IGc2 309..370 CDD:197706
IGc2 399..458 CDD:197706
I-set 477..571 CDD:254352 0/3 (0%)
Ig 477..567 CDD:299845 86/355 (24%)
IG_like 581..662 CDD:214653 23/93 (25%)
IGc2 588..646 CDD:197706 17/70 (24%)
Ig 684..751 CDD:143165 24/77 (31%)
IG_like 686..756 CDD:214653 25/80 (31%)
I-set 760..855 CDD:254352 21/97 (22%)
Ig7_DSCAM 778..855 CDD:143211 16/76 (21%)
IG_like 865..956 CDD:214653 3/25 (12%)
Ig 873..963 CDD:299845 3/17 (18%)
FN3 959..1053 CDD:238020
FN3 1060..1157 CDD:238020
FN3 1165..1271 CDD:238020
FN3 1276..1367 CDD:238020
IGc2 1392..1455 CDD:197706
FN3 1486..1559 CDD:238020
FN3 1573..1649 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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