DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11050 and hddc2

DIOPT Version :10

Sequence 1:NP_609052.1 Gene:CG11050 / 33924 FlyBaseID:FBgn0031836 Length:388 Species:Drosophila melanogaster
Sequence 2:NP_001038696.1 Gene:hddc2 / 554129 ZFINID:ZDB-GENE-050522-394 Length:200 Species:Danio rerio


Alignment Length:179 Identity:86/179 - (48%)
Similarity:117/179 - (65%) Gaps:2/179 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 LGEILQFMELIGNLKHTKRTGWVLRDVNDCESISGHMYRMSMLTFLLDGSEGLNQIRCMELALVH 241
            :..:||||:|:|.||...|||||.|::...||:|.|||||||:...:. ...:|:.|||:|||||
Zfish     1 MDNMLQFMKLVGQLKRVPRTGWVYRNIKQPESVSDHMYRMSMMALTIQ-DISVNKERCMKLALVH 64

  Fly   242 DLAESLVGDITPFCGISKDDKRAMEFKAMEDICKLIEP-RGKRIMELFEEYEHGQTAESKFVKDL 305
            ||||.:||||.|...:||.:|...|..||..|..|::. ..|.|..|:||||...:.|:|.||:|
Zfish    65 DLAECIVGDIAPADNVSKAEKHRREKDAMVHITGLLDDGLRKEIYNLWEEYETQSSPEAKLVKEL 129

  Fly   306 DRLDMVMQAFEYEKRDNCLLKHQEFFDSTEGKFNHPFVKKLVNEIYEQR 354
            |.|:|::||.|||:.:....:.||||.||||||:||.|..|:..:.|:|
Zfish   130 DNLEMIIQAHEYEELEGKPGRLQEFFVSTEGKFHHPEVLGLLKSLNEER 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11050NP_609052.1 HD_3 187..344 CDD:432939 77/157 (49%)
hddc2NP_001038696.1 HD_3 11..164 CDD:432939 75/153 (49%)

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