DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9596 and Trmt6

DIOPT Version :9

Sequence 1:NP_001285679.1 Gene:CG9596 / 33920 FlyBaseID:FBgn0031832 Length:444 Species:Drosophila melanogaster
Sequence 2:NP_001101249.1 Gene:Trmt6 / 311441 RGDID:1308877 Length:495 Species:Rattus norvegicus


Alignment Length:488 Identity:148/488 - (30%)
Similarity:248/488 - (50%) Gaps:81/488 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ATEEDIPR--------IQLGDYIVIQRQ---KYTKLQKFGSLDTTATLGKETLELKSLLDQPYGS 55
            |.|:..|:        |..||::|::|:   |..::|:    ....|..|:...|.:.:...|||
  Rat     5 AAEQPSPQPPHLGDHCIHDGDFVVLKREDVFKAVQVQR----RKKVTFEKQWFYLDNAIGHSYGS 65

  Fly    56 TFKMCVKETKPGKRGAQRQHTLELCSETELRSTREVLGISSSGADNRDIRDDGEAQTLKPEDIAQ 120
            ||     |...|.....|:...|..|||:           .:|.|||:|.|||::|.|..:||..
  Rat    66 TF-----EVSSGGSLQLRKKLEEPTSETK-----------EAGTDNRNIVDDGKSQKLTQDDIKA 114

  Fly   121 LREECNDSSKIIEKLVENSKTFHNRTEYSQEKYLLKKEKKYFEFVQIRQPTIRLMLDIFYRQDSE 185
            |:::.....:|:::|:|||.||.::||::|:||:.||:|||...:.|.:|:.|::..::|.::..
  Rat   115 LKDKGIKGEEIVQQLIENSTTFRDKTEFAQDKYIKKKKKKYEAIITILKPSTRILSIMYYAREPG 179

  Fly   186 KVMGIRVDTLSQIISYSGVCGFGSYLLYESGTNGLLPAAMLNSIGAGTEGTLVHMHPGNVPQKQA 250
            |:..:|.|||:|:::...:.. |:.::.....:||:..||:..:|.  .|:::.::||:.|.:.|
  Rat   180 KINHMRYDTLAQMLTLGNIRA-GNKMIVMETCSGLVLGAMMERMGG--FGSIIQLYPGDGPVRAA 241

  Fly   251 LSALKLPLEQQQRCVSVNLYSVLREF-------YQGGDAKATDIPVVEPSENEP---QETQLETP 305
            .:....|         .:..|.|.||       ...|...| ::...||.::.|   ...:||..
  Rat   242 TACFGFP---------KSFLSGLHEFPLNKVKSLLNGTFSA-EMLSSEPKDSTPVKESNGELEKE 296

  Fly   306 TEEQ---------PEAI-----------EPTTKKPKLDESNSGREGAKGPPRWHLENKR----AT 346
            ..||         ||:.           :|.:|:||  |..|.|:..:...|...|.::    |.
  Rat   297 IAEQADKDSIADGPESNAEQNPVDIVPGDPESKEPK--EKGSKRDYIQEKQRRQEEQRKRHMEAA 359

  Fly   347 ALM-HAEFDSLVVAAKEHPSNILQALLPLVKPSRPVVVFSTCKELLQETFMELKTTGKVTGLHLT 410
            ||: ....|.|:||::.||:.:|.:||..|.||||.||:...||.|.|.:.:|:..|.|..|.|:
  Rat   360 ALLGERNADGLIVASRFHPTPLLLSLLDFVAPSRPFVVYCQYKEPLLECYTKLRERGGVINLRLS 424

  Fly   411 SNWLRTYQILPNRTHPEVNMSGNSGYLLTGYTL 443
            ..|||.||:||:|:||::.|||..||||:|:|:
  Rat   425 ETWLRNYQVLPDRSHPKLLMSGGGGYLLSGFTV 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9596NP_001285679.1 Gcd10p 9..309 CDD:282095 85/320 (27%)
Trmt6NP_001101249.1 Gcd10p 21..261 CDD:398041 78/271 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335396
Domainoid 1 1.000 119 1.000 Domainoid score I5692
eggNOG 1 0.900 - - E1_KOG1416
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6816
Inparanoid 1 1.050 199 1.000 Inparanoid score I3712
OMA 1 1.010 - - QHG53656
OrthoDB 1 1.010 - - D440493at33208
OrthoFinder 1 1.000 - - FOG0004749
OrthoInspector 1 1.000 - - oto98019
orthoMCL 1 0.900 - - OOG6_102534
Panther 1 1.100 - - LDO PTHR12945
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3906
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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