DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX5B and cox5b2

DIOPT Version :10

Sequence 1:NP_609046.1 Gene:COX5B / 33918 FlyBaseID:FBgn0031830 Length:120 Species:Drosophila melanogaster
Sequence 2:NP_001038822.1 Gene:cox5b2 / 751638 ZFINID:ZDB-GENE-060825-71 Length:126 Species:Danio rerio


Alignment Length:124 Identity:51/124 - (41%)
Similarity:70/124 - (56%) Gaps:13/124 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASICGRMALRAA-----ARQNV-AYTPVRFCKMMNDPL--EHATGIEKRELLLKAAGNDNPFDM 57
            |||   ::.|||.     .|||| ..||.|.......|.  |.|.|:|:|.|.....|.| |:.:
Zfish     1 MAS---KLLLRACRVTLMGRQNVFMKTPQRAMAGKGIPTDDEQAAGLERRVLQAMKKGQD-PYSI 61

  Fly    58 KVFKRGAGTKENPNLIPSAFDARIVGCICEEDQTYVQWMWLQKGNQKRC-ECGHWFKLV 115
            ...|:..||:|:|:::||..:.|:|||:||||.|.:.|.||.:||.:|| .||..:|||
Zfish    62 LRPKQYTGTREDPHIVPSINNKRLVGCLCEEDNTAIVWFWLHEGNSQRCPSCGSHYKLV 120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX5BNP_609046.1 Cyt_c_Oxidase_Vb 25..120 CDD:238464 38/94 (40%)
cox5b2NP_001038822.1 Cyt_c_Oxidase_Vb 29..125 CDD:238464 38/93 (41%)

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