Protein Alignment IFT52 and Ift52

DIOPT Version :9

• Sequence 1: NP_609045.2
• Gene: IFT52 / 33917
• FlyBaseID: FBgn0031829
• Length: 434
• Species: Drosophila melanogaster
• Sequence 2: NP_001295318.1
• Gene: Ift52 / 362265
• RGDID: 1311004
• Length: 426
• Species: Rattus norvegicus
• Alignment Length: 437
• Identity: 161/437 - (36%)
• Similarity: 258/437 - (59%)
• Gaps: 34/437 - (7%)

  Fly     4 KPVICFDTSKNERFQISDNYKMMHRKLKVNWNVEQNDAELRMERLARVKIFVLAGPQDRFTEDEF 68
            :..|.|:..|.|.|..:..||.:.::|:.||.::....|:..|:|..||:::.|||:::||..||
  Rat     6 RSTILFNAYKKEVFTTNTGYKSLQKRLRSNWKIQSLKDEITSEKLIGVKLWITAGPREKFTAAEF 70

  Fly    69 DVLKHYVEVQGGSLVVLLGEGGEPEFNTNVNFFLEQYGIYINGDTVVRPHYYKNFHPKECIVGGG 133
            :|||.|:: .||.::|:||||||..|:||:||.||:|||.:|.|.|||..|||.|||||.:|..|
  Rat    71 EVLKKYLD-SGGDILVMLGEGGESRFDTNINFLLEEYGIMVNNDAVVRNVYYKYFHPKEALVSDG 134

  Fly   134 VVCESMWRHLLK-----LDIEKVYYDFSDEKYKIHFQYPYGATLNVSEPANVLLTTGPVVYPFNR 193
            |:...:.|...|     :|.|    :..:....:.|.|||||||:|.:||..:|:||.|.:|.||
  Rat   135 VLNREISRAAGKAVPGVIDEE----NSGNNAQALTFVYPYGATLSVMKPAVAVLSTGSVCFPLNR 195

  Fly   194 PLVG-YFTNGKG-GKILAVGSGYIWHDKYLQDKTNDAMFEYLIKLLGGDEITYSHLDFNDVELSD 256
            |::. |.:..:| ||:..:||.:::.|:||..:.|..:.:.:.:.|...:|..:.:|..|.|:||
  Rat   196 PILAFYHSKNQGFGKLAVLGSCHMFSDQYLDKEENSKIMDVVFQWLTTGDIHLNQIDAEDPEISD 260

  Fly   257 NKHFTDIGFLADMPKACLIDSIGTDMPTDFKQMFDMRLCRLSNRLLKDVMDTYEQLHVKYEPLKI 321
            .....|...|::..:.||.:  |.:.|.||..:||:.:.:|....|..|:..:|:|:||:|||::
  Rat   261 YTMVPDTATLSEQLRVCLQE--GDENPRDFTTLFDLSIYQLDTTCLPKVIKAHEELNVKHEPLQL 323

  Fly   322 IKPQFEIPLPNVQLATFPPIFSEPSAPPLELYDLDETFSGARSQLAHMTGQVLQALQSKEPQRRA 386
            ::||||:|||.:|.|.|||.|.|...|||||:|||||||..:::||.:|.:
  Rat   324 VQPQFEMPLPALQPAVFPPSFRELPPPPLELFDLDETFSSEKARLAQITNK-------------- 374

  Fly   387 LNQRELENYIKECARITAIVD----ERQDMAAREILNIVARQIISYR 429
            ....:||.|:::|..|..:..    ::||  |:.||..:..|::.::
  Rat   375 CTDEDLEFYVRKCGDILGVTSKLPKDQQD--AKHILEHIFFQVVEFK 419

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
IFT52	NP_609045.2	ABC_transp_aux	<1..115	CDD:420021	47/110 (43%)
Ift52	NP_001295318.1	ABC_transp_aux	<17..116	CDD:304962	44/99 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166353723
Domainoid	1	1.000	134	1.000	Domainoid score	I4909
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H9335
Inparanoid	1	1.050	239	1.000	Inparanoid score	I3282
OMA	1	1.010	-	-		QHG56686
OrthoDB	1	1.010	-	-		D284059at33208
OrthoFinder	1	1.000	-	-		FOG0008331
OrthoInspector	1	1.000	-	-		oto97756
orthoMCL	1	0.900	-	-		OOG6_104610
Panther	1	1.100	-	-	LDO	PTHR12969
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X6312
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	14	13.910