DRSC/TRiP Functional Genomics Resources

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Protein Alignment IFT52 and Ift52

DIOPT Version :10

Sequence 1:NP_609045.2 Gene:IFT52 / 33917 FlyBaseID:FBgn0031829 Length:434 Species:Drosophila melanogaster
Sequence 2:NP_742162.2 Gene:Ift52 / 245866 MGIID:2387217 Length:426 Species:Mus musculus


Alignment Length:437 Identity:160/437 - (36%)
Similarity:258/437 - (59%) Gaps:34/437 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KPVICFDTSKNERFQISDNYKMMHRKLKVNWNVEQNDAELRMERLARVKIFVLAGPQDRFTEDEF 68
            :..|.|:..|.|.|..:..||.:.::|:.||.::....|:..|:|..||:::.|||:::||..||
Mouse     6 RSTILFNAYKKEVFTTNTGYKSLQKRLRSNWKIQSLKDEITSEKLIGVKLWITAGPREKFTAAEF 70

  Fly    69 DVLKHYVEVQGGSLVVLLGEGGEPEFNTNVNFFLEQYGIYINGDTVVRPHYYKNFHPKECIVGGG 133
            :|||.|:: .||.::|:||||||..|:||:||.||:|||.:|.|.|||..|||.|||||.:|..|
Mouse    71 EVLKKYLD-SGGDILVMLGEGGESRFDTNINFLLEEYGIMVNNDAVVRNVYYKYFHPKEALVSDG 134

  Fly   134 VVCESMWRHLLK-----LDIEKVYYDFSDEKYKIHFQYPYGATLNVSEPANVLLTTGPVVYPFNR 193
            |:...:.|...|     :|.|    :..:....:.|.||:||||:|.:||..:|:||.|.:|.||
Mouse   135 VLNREISRAAGKAVPGVIDEE----NSGNNAQALTFVYPFGATLSVMKPAVAVLSTGSVCFPLNR 195

  Fly   194 PLVG-YFTNGKG-GKILAVGSGYIWHDKYLQDKTNDAMFEYLIKLLGGDEITYSHLDFNDVELSD 256
            |::. |.:..:| ||:..:||.:::.|:||..:.|..:.:.:.:.|...:|..:.:|..|.|:||
Mouse   196 PILAFYHSKNQGFGKLAVLGSCHMFSDQYLDKEENSKIMDVVFQWLTTGDIHLNQIDAEDPEISD 260

  Fly   257 NKHFTDIGFLADMPKACLIDSIGTDMPTDFKQMFDMRLCRLSNRLLKDVMDTYEQLHVKYEPLKI 321
            .....|...|::..:.||.:  |.:.|.||..:||:.:.:|....|..|:..:|:|:||:|||::
Mouse   261 YTMVPDTATLSEQLRVCLQE--GDENPRDFTTLFDLSIYQLDTTCLPKVIKAHEELNVKHEPLQL 323

  Fly   322 IKPQFEIPLPNVQLATFPPIFSEPSAPPLELYDLDETFSGARSQLAHMTGQVLQALQSKEPQRRA 386
            ::||||:|||.:|.|.|||.|.|...|||||:|||||||..:::||.:|.:              
Mouse   324 VQPQFEMPLPALQPAVFPPSFRELPPPPLELFDLDETFSSEKARLAQITNK-------------- 374

  Fly   387 LNQRELENYIKECARITAIVD----ERQDMAAREILNIVARQIISYR 429
            ....:||.|:::|..|..:..    ::||  |:.||..:..|::.::
Mouse   375 CTDEDLEFYVRKCGDILGVTSKLPKDQQD--AKHILEHIFFQVVEFK 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IFT52NP_609045.2 ABC_transp_aux <1..115 CDD:451555 47/110 (43%)
IFT52_CTD 353..429 CDD:467897 21/79 (27%)
Ift52NP_742162.2 ABC_transp_aux <28..116 CDD:451555 40/88 (45%)
IFT52_CTD 355..422 CDD:467897 21/81 (26%)

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