DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB43 and Rab8

DIOPT Version :10

Sequence 1:NP_940892.1 Gene:RAB43 / 339122 HGNCID:19983 Length:212 Species:Homo sapiens
Sequence 2:NP_524172.1 Gene:Rab8 / 40168 FlyBaseID:FBgn0262518 Length:207 Species:Drosophila melanogaster


Alignment Length:166 Identity:85/166 - (51%)
Similarity:124/166 - (74%) Gaps:1/166 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    15 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 79
            ||:||||:|:||:.|||||::.||...||:....||||:||.::|:|:..|::||||||||||||
  Fly     5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQER 69

Human    80 FRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLA 144
            |||||.:|||.|.|.:|.||||:..||.::.:||.::.:.|.:::.::|:|||.:|::.|:||..
  Fly    70 FRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNKCELTDKRQVSKE 134

Human   145 EAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
            ..:.||..|.|. .:|||||.|.|||||||.:|:::
  Fly   135 RGEQLAIEYGIK-FMETSAKASINVEEAFLTLASDI 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB43NP_940892.1 Rab19 16..180 CDD:133267 84/163 (52%)
Effector region. /evidence=ECO:0000250 47..55 4/7 (57%)
Rab8NP_524172.1 Rab8_Rab10_Rab13_like 6..172 CDD:206659 84/165 (51%)

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