DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB43 and Rab14

DIOPT Version :10

Sequence 1:NP_940892.1 Gene:RAB43 / 339122 HGNCID:19983 Length:212 Species:Homo sapiens
Sequence 2:NP_788056.1 Gene:Rab14 / 34840 FlyBaseID:FBgn0015791 Length:239 Species:Drosophila melanogaster


Alignment Length:209 Identity:82/209 - (39%)
Similarity:118/209 - (56%) Gaps:12/209 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    15 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQER 79
            |:::||.:::||..|||:|::.:|....|......||||:|..:.:|:..|::||||||||||||
  Fly    32 YNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWDTAGQER 96

Human    80 FRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLA 144
            ||.:|:||||.|.||::.||||:||::..:..|:.|.|.....:.|..||||||||...|||:..
  Fly    97 FRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLESTREVTYE 161

Human   145 EAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATELIMR-----------HGGPLFSEKSPDHIQ 198
            ||:..|:...:: .:|.||....|||||||..|.::...           ..|.......|....
  Fly   162 EAKEFADENGLM-FLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNASESGVQHRPSQPSRTS 225

Human   199 LNSKDIGEGWGCGC 212
            |:|:..|....|.|
  Fly   226 LSSEATGAKDQCSC 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB43NP_940892.1 Rab19 16..180 CDD:133267 74/163 (45%)
Effector region. /evidence=ECO:0000250 47..55 4/7 (57%)
Rab14NP_788056.1 Rab14 34..199 CDD:133322 74/165 (45%)

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